C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 15381
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121501 Gm15381-001 ENSMUSG00000081771 10090 - 15:91556762-91557917 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartLiverLungOvaryPlacentaENSMUST00000121501
Transcript ID Adipose Bladder Brain Breast Colon Heart Liver Lung Ovary Placenta
ENSMUST00000121501 0.193±0.00 0.006±0.00 0.062±0.01 0.202±0.08 0.172±0.00 0.083±0.00 0.008±0.00 0.098±0.00 0.021±0.00 0.005±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006HV CIL_0006HV_0002 CGP 15:91199494-91573261
CIL_0006R2 CIL_0006R2_0002 CGP 15:91267696-91816120

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000309784 TRIM59-001 protein_coding Homo_sapiens 0 1035
ENST00000471155 TRIM59-004 protein_coding Homo_sapiens 0 359
ENST00000471396 TRIM59-005 protein_coding Homo_sapiens 0 497
ENST00000479460 TRIM59-007 protein_coding Homo_sapiens 0 551
ENST00000483754 RP11-432B6.3-001 nonsense_mediated_decay Homo_sapiens 0 891
ENST00000494486 TRIM59-008 protein_coding Homo_sapiens 0 350
ENST00000496222 TRIM59-006 protein_coding Homo_sapiens 0 486
ENST00000543469 TRIM59-201 protein_coding Homo_sapiens 0 894

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