C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006IO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000015807-ENSDARG00000070435 CGP 7955 6:49503280-49588195
GeneTranscriptPositionBiotype
ENSDARG00000015807 (rab22a)
RAB22A, member RAS oncogene family 		ENSDART00000022581 (rab22a-001) 49503280-49531752 protein_coding
ENSDART00000141438 (rab22a-002) 49518237-49521118 processed_transcript
ENSDARG00000070435 (vapb)
vesicle-associated membrane protein, associated protein B and C 		ENSDART00000103357 (vapb-001) 49534819-49588195 protein_coding
CIL_0006IO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000124209-ENSG00000124164 CGP 9606 20:58309696-58451101
GeneTranscriptPositionBiotype
ENSG00000124164 (VAPB)
VAMP (vesicle-associated membrane protein)-associated protein B and C 		ENST00000265619 (VAPB-004) 58389375-58446905 processed_transcript
ENST00000395802 (VAPB-002) 58389313-58445552 protein_coding
ENST00000463370 (VAPB-003) 58431033-58445552 processed_transcript
ENST00000475243 (VAPB-001) 58389122-58451101 protein_coding
ENST00000476395 (VAPB-005) 58438977-58445552 retained_intron
ENST00000520497 (VAPB-006) 58389366-58444531 nonsense_mediated_decay
ENSG00000124209 (RAB22A)
RAB22A, member RAS oncogene family 		ENST00000244040 (RAB22A-001) 58309696-58367507 protein_coding
ENST00000488949 (RAB22A-002) 58309758-58346048 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006IO_0001ENSDARG00000015807ENSDART00000022581ENSDART00000141438ENSDARG00000070435ENSDART00000103357CIL_0006IO_0002ENSG00000124164ENST00000265619ENST00000395802ENST00000463370ENST00000475243ENST00000476395ENST00000520497ENSG00000124209ENST00000244040ENST00000488949
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006IO_0001ENSDARG00000015807ENSDART00000022581ENSDARG00000070435ENSDART00000103357CIL_0006IO_0002ENSG00000124164ENST00000265619ENST00000395802ENST00000463370ENST00000475243ENST00000520497ENSG00000124209ENST00000244040
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000015807 ENSDART00000022581 N/A N/A N/A 11.614±1.63 N/A N/A 7.661±2.36 4.080±0.21 0.341±0.00 N/A 4.573±0.00 N/A N/A N/A
ENSDART00000141438 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000070435 ENSDART00000103357 N/A N/A N/A 18.990±0.00 N/A N/A 25.055±11.86 25.315±13.21 2.839±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000124164 ENST00000265619 N/A N/A N/A N/A N/A N/A 0.615±0.00 1.704±0.00 N/A N/A N/A N/A N/A N/A
ENST00000395802 7.227±0.00 11.661±0.00 N/A N/A 8.131±0.00 10.271±0.00 9.074±0.00 8.453±5.90 10.051±0.00 4.645±0.00 13.075±0.00 13.724±6.77 8.896±0.87 6.697±0.08
ENST00000463370 N/A N/A N/A N/A N/A N/A N/A 1.915±0.00 N/A N/A N/A N/A 3.190±1.00 N/A
ENST00000475243 2.171±0.00 3.732±0.00 1.545±0.00 8.034±3.49 2.963±2.36 3.385±1.90 3.558±2.10 4.267±2.85 2.769±0.26 1.049±0.23 5.267±1.06 5.049±1.86 1.826±0.32 2.756±1.53
ENST00000476395 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520497 N/A N/A N/A N/A N/A 4.943±0.00 N/A N/A 6.814±0.00 N/A N/A 7.081±0.00 N/A N/A
ENSG00000124209 ENST00000244040 4.833±0.00 3.829±0.00 1.994±0.00 7.449±0.02 5.232±0.07 3.404±0.54 1.372±0.38 3.226±1.06 2.799±0.99 3.023±0.33 1.012±0.49 5.663±1.11 2.300±0.70 4.475±0.81
ENST00000488949 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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