C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006JH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000080561-ENSG00000170925 CGP 9606 X:107825755-107982370
GeneTranscriptPositionBiotype
ENSG00000080561 (MID2)
midline 2 		ENST00000262843 (MID2-001) 107825879-107927193 protein_coding
ENST00000443968 (MID2-002) 107826414-107927193 protein_coding
ENST00000451923 (MID2-003) 107825755-107841381 protein_coding
ENST00000474517 (MID2-004) 107917502-107926472 retained_intron
ENSG00000170925 (TEX13B)
testis expressed 13B 		ENST00000302917 (TEX13B-001) 107980864-107982370 protein_coding
ENSG00000225728 (RP6-191P20.3)
 ENST00000451535 (RP6-191P20.3-001) 107939263-107939642 processed_pseudogene
ENSG00000236064 (RP6-191P20.4)
 ENST00000430140 (RP6-191P20.4-001) 107894597-107935980 antisense
ENSG00000277883 (RP6-191P20.5)
 ENST00000622303 (RP6-191P20.5-001) 107974078-107985008 unprocessed_pseudogene
CIL_0006JH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000000266-ENSMUSG00000042386 CGP 10090 X:140664599-140813433
GeneTranscriptPositionBiotype
ENSMUSG00000042386 (Tex13)
testis expressed gene 13 		ENSMUST00000044179 (Tex13-001) 140808307-140813433 protein_coding
ENSMUST00000132970 (Tex13-002) 140809268-140810852 retained_intron
ENSMUSG00000083646 (Gm6088)
predicted gene 6088 		ENSMUST00000117257 (Gm6088-001) 140797396-140799934 processed_pseudogene
ENSMUSG00000085146 (Eif2c5)
eukaryotic translation initiation factor 2C, 5 		ENSMUST00000125609 (Eif2c5-001) 140776235-140796880 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006JH_0001ENSG00000080561ENST00000262843ENST00000443968ENST00000451923ENST00000474517ENSG00000170925ENST00000302917ENSG00000225728ENST00000451535ENSG00000236064ENST00000430140ENSG00000277883ENST00000622303CIL_0006JH_0002ENSMUSG00000042386ENSMUST00000044179ENSMUST00000132970ENSMUSG00000083646ENSMUST00000117257ENSMUSG00000085146ENSMUST00000125609
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006JH_0001ENSG00000080561ENST00000262843ENST00000443968ENST00000451923ENST00000474517ENSG00000170925ENST00000302917ENSG00000225728ENST00000451535ENSG00000236064ENST00000430140ENSG00000277883ENST00000622303CIL_0006JH_0002ENSMUSG00000042386ENSMUST00000044179ENSMUST00000132970ENSMUSG00000083646ENSMUST00000117257ENSMUSG00000085146ENSMUST00000125609
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000080561 ENST00000262843 1.640±0.00 N/A N/A N/A N/A N/A 0.110±0.00 0.640±0.00 N/A 1.757±1.44 N/A 0.610±0.40 N/A 0.230±0.00
ENST00000443968 N/A N/A N/A 0.995±0.00 N/A N/A 0.304±0.00 0.787±0.11 1.672±0.57 0.373±0.00 2.082±0.00 4.425±0.00 0.628±0.19 0.184±0.00
ENST00000451923 N/A N/A 2.108±0.00 1.190±0.00 N/A N/A N/A 0.959±0.00 N/A N/A N/A N/A 0.543±0.00 N/A
ENST00000474517 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.211±0.00 N/A 0.354±0.00
ENSG00000170925 ENST00000302917 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.522±0.37
ENSG00000225728 ENST00000451535 N/A N/A N/A 0.049±0.00 N/A N/A N/A N/A N/A N/A N/A 0.214±0.00 N/A N/A
ENSG00000236064 ENST00000430140 0.005±0.00 0.064±0.00 N/A 0.228±0.09 0.060±0.00 0.018±0.00 0.010±0.00 0.019±0.00 0.203±0.00 0.137±0.13 0.022±0.00 0.010±0.00 0.017±0.00 0.054±0.04
ENSG00000277883 ENST00000622303 N/A N/A N/A 0.044±0.02 N/A 0.089±0.00 N/A 0.026±0.00 0.113±0.00 N/A N/A 0.039±0.03 N/A 0.057±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000042386 ENSMUST00000044179 0.049±0.00 N/A 0.007±0.00 0.015±0.01 N/A 0.043±0.00 0.044±0.02 0.018±0.00 0.008±0.00 0.029±0.00 0.016±0.00 0.093±0.06 1.303±1.24 1.326±1.02
ENSMUST00000132970 0.030±0.00 N/A 0.018±0.00 0.019±0.00 0.070±0.00 0.097±0.00 N/A N/A N/A N/A N/A 0.065±0.03 1.215±0.28 0.448±0.00
ENSMUSG00000083646 ENSMUST00000117257 0.061±0.02 N/A 0.003±0.00 0.013±0.00 0.047±0.01 N/A 0.011±0.00 N/A 0.003±0.00 0.015±0.00 N/A 0.036±0.01 0.043±0.04 0.047±0.03
ENSMUSG00000085146 ENSMUST00000125609 0.074±0.01 N/A 0.006±0.00 N/A N/A N/A 0.036±0.01 N/A 0.008±0.00 0.057±0.02 N/A N/A 0.054±0.03 0.138±0.09

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