C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: midline 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000443968 MID2-002 ENSG00000080561 9606 + X:107826414-107927193 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000443968
Transcript ID Brain Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000443968 0.995±0.00 0.304±0.00 0.787±0.11 1.672±0.57 0.373±0.00 2.082±0.00 4.425±0.00 0.628±0.19 0.184±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006JH CIL_0006JH_0001 CGP X:107825755-107982370

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0005737 IEA cytoplasm
GO:0005874 IDA microtubule
GO:0008017 IMP microtubule binding
GO:0008270 IEA zinc ion binding
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0032897 IDA negative regulation of viral transcription
GO:0035372 IMP protein localization to microtubule
GO:0042803 IDA protein homodimerization activity
GO:0043123 IDA positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0045087 IDA innate immune response
GO:0046597 IDA negative regulation of viral entry into host cell
GO:0046872 IEA metal ion binding
GO:0046982 IDA protein heterodimerization activity
GO:0051091 IMP positive regulation of sequence-specific DNA binding transcription factor activity
GO:0051092 IMP positive regulation of NF-kappaB transcription factor activity
GO:0051219 IPI phosphoprotein binding
GO:0070062 IDA extracellular vesicular exosome
GO:1902187 IDA negative regulation of viral release from host cell

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000112990 Mid2-001 protein_coding Mus_musculus 0 3267
ENSMUST00000112993 Mid2-201 protein_coding Mus_musculus 0 3210
ENSMUST00000112988 Mid2-002 protein_coding Mus_musculus 0 2089
ENSMUST00000128809 Mid2-006 protein_coding Mus_musculus 0 1062
ENSMUST00000140144 Mid2-005 retained_intron Mus_musculus 0 431

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