C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 6088
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117257 Gm6088-001 ENSMUSG00000083646 10090 + X:140797396-140799934 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartLiverLungOvaryPlacentaTestisENSMUST00000117257
Transcript ID Adipose Bladder Brain Breast Heart Liver Lung Ovary Placenta Testis
ENSMUST00000117257 0.061±0.02 0.003±0.00 0.013±0.00 0.047±0.01 0.011±0.00 0.003±0.00 0.015±0.00 0.036±0.01 0.043±0.04 0.047±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006JH CIL_0006JH_0002 CGP X:140664599-140813433

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000156255 AGO1-001 protein_coding Danio_rerio 0 850
ENSDART00000138318 AGO1-201 protein_coding Danio_rerio 0 785
ENST00000220592 AGO2-001 protein_coding Homo_sapiens 0 2582
ENST00000519980 AGO2-002 protein_coding Homo_sapiens 0 2333
ENST00000520412 AGO2-008 retained_intron Homo_sapiens 0 486
ENST00000520628 AGO2-010 processed_transcript Homo_sapiens 2e-20 102
ENST00000523609 AGO2-003 nonsense_mediated_decay Homo_sapiens 0 2375

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