C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006L1_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000029710-ENSDARG00000056043 CGP 7955 24:43440480-43542769
GeneTranscriptPositionBiotype
ENSDARG00000029710 (lrrc30a)
leucine rich repeat containing 30a 		ENSDART00000046821 (lrrc30a-201) 43440480-43443061 protein_coding
ENSDART00000126574 (lrrc30a-202) 43441862-43442918 protein_coding
ENSDARG00000056043 (lama1)
laminin, alpha 1 		ENSDART00000078414 (lama1-201) 43450377-43542686 protein_coding
ENSDART00000108598 (lama1-202) 43450377-43542737 protein_coding
ENSDART00000154450 (lama1-001) 43537658-43542769 protein_coding

Danio rerio Ensembl (Zv9)

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Structures from Ensembl
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CIL_0006L1_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000073375-ENSMUSG00000032796 CGP 10090 17:67630965-67822645
GeneTranscriptPositionBiotype
ENSMUSG00000032796 (Lama1)
laminin, alpha 1 		ENSMUST00000035471 (Lama1-201) 67697265-67822645 protein_coding
ENSMUSG00000073375 (Lrrc30)
leucine rich repeat containing 30 		ENSMUST00000097290 (Lrrc30-201) 67630965-67632723 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006L1_0001ENSDARG00000029710ENSDART00000046821ENSDART00000126574ENSDARG00000056043ENSDART00000078414ENSDART00000108598ENSDART00000154450CIL_0006L1_0002ENSMUSG00000032796ENSMUST00000035471ENSMUSG00000073375ENSMUST00000097290
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006L1_0001ENSDARG00000029710ENSDART00000046821ENSDART00000126574ENSDARG00000056043ENSDART00000078414ENSDART00000108598CIL_0006L1_0002ENSMUSG00000032796ENSMUST00000035471ENSMUSG00000073375ENSMUST00000097290
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000029710 ENSDART00000046821 N/A N/A N/A 0.105±0.00 N/A N/A N/A 0.621±0.00 N/A N/A 17.015±0.00 N/A N/A N/A
ENSDART00000126574 N/A N/A N/A 0.315±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000056043 ENSDART00000078414 N/A N/A N/A 0.428±0.00 N/A N/A 0.353±0.24 N/A 0.063±0.00 N/A N/A N/A N/A N/A
ENSDART00000108598 N/A N/A N/A 0.975±0.76 N/A N/A N/A N/A N/A N/A 0.243±0.00 N/A N/A N/A
ENSDART00000154450 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032796 ENSMUST00000035471 0.174±0.17 1.582±0.27 0.159±0.02 2.139±1.33 0.452±0.12 0.284±0.11 0.008±0.00 1.486±0.73 0.564±0.18 0.141±0.05 0.004±0.00 22.316±5.02 28.813±17.65 1.227±0.43
ENSMUSG00000073375 ENSMUST00000097290 0.016±0.00 0.265±0.11 0.009±0.00 N/A 3.883±2.46 N/A 0.167±0.07 0.400±0.00 0.004±0.00 N/A 67.338±22.21 0.670±0.29 0.015±0.00 0.011±0.00

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