C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006OP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000043591-ENSG00000165813 CGP 9606 10:114044056-114174220
GeneTranscriptPositionBiotype
ENSG00000043591 (ADRB1)
adrenoceptor beta 1 		ENST00000369295 (ADRB1-001) 114044056-114046908 protein_coding
ENSG00000165813 (CCDC186)
coiled-coil domain containing 186 		ENST00000369285 (CCDC186-003) 114161608-114174202 protein_coding
ENST00000369286 (CCDC186-002) 114161608-114174220 protein_coding
ENST00000369287 (CCDC186-006) 114120862-114174220 protein_coding
ENST00000428953 (CCDC186-001) 114124929-114144602 protein_coding
ENST00000490661 (CCDC186-005) 114131026-114132094 retained_intron
ENST00000497592 (CCDC186-004) 114130199-114131336 processed_transcript
ENSG00000253066 (RNU6-709P)
RNA, U6 small nuclear 709, pseudogene 		ENST00000517257 (RNU6-709P-201) 114111414-114111517 snRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0006OP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000035283-ENSMUSG00000035173 CGP 10090 19:56722372-56822190
GeneTranscriptPositionBiotype
ENSMUSG00000035173 (A630007B06Rik)
coiled-coil domain containing 186 		ENSMUST00000076085 (A630007B06Rik-201) 56790963-56813683 protein_coding
ENSMUST00000118592 (A630007B06Rik-001) 56787481-56822190 protein_coding
ENSMUST00000135666 (A630007B06Rik-005) 56790531-56795155 protein_coding
ENSMUST00000140184 (A630007B06Rik-002) 56800039-56822190 retained_intron
ENSMUST00000140705 (A630007B06Rik-004) 56792962-56797508 retained_intron
ENSMUST00000156708 (A630007B06Rik-003) 56797349-56800986 retained_intron
ENSMUSG00000035283 (Adrb1)
adrenergic receptor, beta 1 		ENSMUST00000038949 (Adrb1-201) 56722372-56724862 protein_coding
ENSMUSG00000067063 (Gm6990)
predicted pseudogene 6990 		ENSMUST00000086830 (Gm6990-001) 56754999-56755346 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006OP_0001ENSG00000043591ENST00000369295ENSG00000165813ENST00000369285ENST00000369286ENST00000369287ENST00000428953ENST00000490661ENST00000497592ENSG00000253066ENST00000517257CIL_0006OP_0002ENSMUSG00000035173ENSMUST00000076085ENSMUST00000118592ENSMUST00000135666ENSMUST00000140184ENSMUST00000140705ENSMUST00000156708ENSMUSG00000035283ENSMUST00000038949ENSMUSG00000067063ENSMUST00000086830
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006OP_0001ENSG00000043591ENST00000369295ENSG00000165813ENST00000369285ENST00000369286ENST00000369287ENST00000428953ENSG00000253066ENST00000517257CIL_0006OP_0002ENSMUSG00000035173ENSMUST00000076085ENSMUST00000118592ENSMUST00000140184ENSMUSG00000035283ENSMUST00000038949ENSMUSG00000067063ENSMUST00000086830
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000043591 ENST00000369295 3.642±0.00 0.413±0.00 0.065±0.00 3.883±1.61 4.067±3.95 0.535±0.30 7.124±3.77 0.730±0.00 0.191±0.14 5.078±0.70 0.083±0.00 0.669±0.79 41.078±17.44 0.406±0.17
ENSG00000165813 ENST00000369285 N/A N/A N/A N/A N/A N/A 1.563±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000369286 N/A N/A N/A N/A N/A N/A N/A 1.075±0.00 N/A N/A N/A N/A N/A N/A
ENST00000369287 0.795±0.00 1.607±0.00 2.852±0.00 1.679±1.14 2.777±2.29 2.923±1.72 1.261±0.13 4.209±0.00 1.669±1.12 2.238±0.50 N/A 2.897±2.19 1.309±0.74 2.746±0.72
ENST00000428953 N/A N/A N/A 1.397±0.00 N/A N/A N/A N/A N/A 3.698±0.00 N/A 2.961±0.00 2.745±0.00 5.258±2.79
ENST00000490661 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497592 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000253066 ENST00000517257 N/A N/A N/A N/A N/A N/A 0.624±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000035173 ENSMUST00000076085 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.313±0.00 6.484±1.92 3.496±0.00 29.933±39.84
ENSMUST00000118592 0.799±0.00 0.955±0.33 2.613±0.51 3.362±0.81 1.009±0.30 1.713±0.97 1.164±0.54 1.144±0.37 1.028±0.29 2.579±0.88 2.179±0.42 1.888±0.92 3.462±1.55 2.489±0.85
ENSMUST00000135666 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140184 N/A 5.354±0.13 N/A 18.230±0.00 N/A N/A N/A N/A N/A N/A N/A 21.212±0.00 16.416±0.00 204.281±0.00
ENSMUST00000140705 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156708 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000035283 ENSMUST00000038949 2.492±0.95 4.193±1.01 0.647±0.07 4.235±4.66 4.057±2.49 3.581±0.61 8.796±1.97 1.645±0.24 0.388±0.17 37.256±12.11 0.054±0.03 1.498±0.62 8.687±8.28 1.631±0.69
ENSMUSG00000067063 ENSMUST00000086830 0.329±0.11 0.487±0.23 0.045±0.00 0.041±0.00 0.957±0.66 0.214±0.02 0.693±0.61 0.448±0.28 0.066±0.00 0.474±0.08 0.236±0.00 0.767±0.38 0.175±0.11 1.370±0.70

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