C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006Q6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000131507-ENSG00000187678 CGP 9606 5:142108505-142326455
GeneTranscriptPositionBiotype
ENSG00000131507 (NDFIP1)
Nedd4 family interacting protein 1 		ENST00000253814 (NDFIP1-001) 142108505-142154443 protein_coding
ENST00000503388 (NDFIP1-002) 142142978-142154195 retained_intron
ENST00000505614 (NDFIP1-004) 142135730-142138192 retained_intron
ENST00000509436 (NDFIP1-003) 142108788-142134068 processed_transcript
ENSG00000187678 (SPRY4)
sprouty homolog 4 (Drosophila) 		ENST00000344120 (SPRY4-001) 142310427-142325001 protein_coding
ENST00000434127 (SPRY4-002) 142312974-142325040 protein_coding
ENST00000503582 (SPRY4-005) 142315109-142324417 processed_transcript
ENST00000509364 (SPRY4-004) 142324899-142326455 processed_transcript
ENST00000511815 (SPRY4-006) 142314958-142324182 protein_coding
ENSG00000231185 (AC005592.2)
 ENST00000414314 (AC005592.2-003) 142581848-142627190 antisense
ENST00000425963 (AC005592.2-002) 142404218-142530130 antisense
ENST00000443800 (AC005592.2-001) 142404201-142672001 antisense
ENST00000510311 (AC005592.2-004) 142325293-142464054 antisense
ENST00000514303 (AC005592.2-006) 142353543-142375654 antisense
ENST00000515288 (AC005592.2-005) 142325298-142353621 antisense
ENSG00000274721 (SPRY4-IT1_2)
SPRY4-IT1 conserved region 2 		ENST00000612613 (SPRY4-IT1_2.1-201) 142318047-142318167 misc_RNA
ENSG00000277968 (SPRY4-IT1_1)
SPRY4-IT1 conserved region 1 		ENST00000611334 (SPRY4-IT1_1.1-201) 142317830-142317920 misc_RNA
ENSG00000280047 (CTC-463A16.1)
 ENST00000622952 (CTC-463A16.1-001) 142165767-142168387 TEC
CIL_0006Q6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024425-ENSMUSG00000024427 CGP 10090 18:38418975-38601268
GeneTranscriptPositionBiotype
ENSMUSG00000024425 (Ndfip1)
Nedd4 family interacting protein 1 		ENSMUST00000025293 (Ndfip1-201) 38418975-38464399 protein_coding
ENSMUSG00000024427 (Spry4)
sprouty homolog 4 (Drosophila) 		ENSMUST00000025295 (Spry4-201) 38586268-38601268 protein_coding
ENSMUSG00000099157 (Gm27804)
predicted gene, 27804 		ENSMUST00000185135 (Gm27804-201) 38594365-38594483 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006Q6_0001ENSG00000131507ENST00000253814ENST00000503388ENST00000505614ENST00000509436ENSG00000187678ENST00000344120ENST00000434127ENST00000503582ENST00000509364ENST00000511815ENSG00000231185ENST00000414314ENST00000425963ENST00000443800ENST00000510311ENST00000514303ENST00000515288ENSG00000274721ENST00000612613ENSG00000277968ENST00000611334ENSG00000280047ENST00000622952CIL_0006Q6_0002ENSMUSG00000024425ENSMUST00000025293ENSMUSG00000024427ENSMUST00000025295ENSMUSG00000099157ENSMUST00000185135
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006Q6_0001ENSG00000131507ENST00000253814ENST00000503388ENSG00000187678ENST00000344120ENST00000434127ENST00000511815ENSG00000231185ENST00000414314ENST00000425963ENST00000443800ENST00000510311ENST00000515288ENSG00000274721ENST00000612613ENSG00000277968ENST00000611334ENSG00000280047ENST00000622952CIL_0006Q6_0002ENSMUSG00000024425ENSMUST00000025293ENSMUSG00000024427ENSMUST00000025295ENSMUSG00000099157ENSMUST00000185135
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000131507 ENST00000253814 21.814±0.00 14.333±0.00 6.804±0.00 73.206±8.94 17.303±7.20 13.588±4.68 12.190±4.76 30.045±7.98 18.653±3.40 18.774±3.68 7.090±3.41 20.097±8.33 25.905±1.35 24.992±4.42
ENST00000503388 N/A N/A 0.818±0.00 N/A 1.319±0.00 N/A N/A N/A N/A N/A 0.597±0.00 1.338±0.00 N/A N/A
ENST00000505614 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509436 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000187678 ENST00000344120 N/A N/A N/A 1.390±0.00 3.187±2.22 N/A 0.875±0.49 N/A 0.614±0.00 N/A 0.130±0.00 N/A N/A N/A
ENST00000434127 N/A N/A 0.726±0.00 N/A N/A N/A N/A N/A N/A N/A 0.698±0.00 N/A N/A N/A
ENST00000503582 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509364 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511815 N/A N/A N/A N/A N/A N/A N/A 4.161±0.00 N/A N/A 1.005±0.00 N/A N/A N/A
ENSG00000231185 ENST00000414314 N/A N/A 0.516±0.00 0.078±0.00 N/A 0.459±0.00 N/A 0.139±0.00 N/A N/A N/A N/A 0.116±0.00 N/A
ENST00000425963 N/A N/A N/A N/A N/A N/A N/A 0.166±0.00 N/A N/A N/A N/A 0.278±0.00 N/A
ENST00000443800 0.133±0.00 N/A N/A 1.080±0.00 0.225±0.00 0.051±0.00 0.026±0.00 N/A 0.364±0.00 0.026±0.00 N/A N/A 0.125±0.00 N/A
ENST00000510311 0.027±0.00 0.337±0.00 N/A N/A N/A N/A N/A N/A 0.295±0.00 N/A N/A 0.185±0.00 N/A 0.080±0.00
ENST00000514303 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515288 N/A N/A N/A N/A 0.097±0.00 0.237±0.00 0.057±0.00 0.305±0.00 N/A 0.349±0.00 N/A N/A 0.210±0.00 0.104±0.04
ENSG00000274721 ENST00000612613 N/A 0.878±0.00 N/A N/A 0.176±0.00 N/A 0.637±0.00 1.367±0.00 0.465±0.00 N/A N/A N/A N/A N/A
ENSG00000277968 ENST00000611334 0.663±0.00 N/A N/A N/A 0.724±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000280047 ENST00000622952 0.488±0.00 0.510±0.00 0.258±0.00 1.170±1.03 0.748±0.55 0.850±0.00 0.116±0.02 0.898±0.00 0.211±0.08 0.314±0.09 0.162±0.00 0.310±0.33 0.202±0.07 0.619±0.28
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024425 ENSMUST00000025293 82.465±5.36 646.331±106.66 38.723±8.58 110.691±5.38 81.019±39.26 74.224±35.21 26.649±2.73 76.284±24.64 71.287±53.46 43.051±18.85 13.934±3.00 201.722±108.29 43.874±11.58 50.800±18.16
ENSMUSG00000024427 ENSMUST00000025295 7.223±1.35 8.627±0.61 2.548±0.17 1.218±0.22 4.706±0.57 5.787±0.43 4.395±0.68 2.739±0.80 2.913±2.07 11.935±2.51 0.717±0.22 5.636±2.23 1.463±1.09 0.608±0.32
ENSMUSG00000099157 ENSMUST00000185135 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 40.682±0.00 N/A N/A

Loading