C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006QV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000137801-ENSG00000150667 CGP 9606 15:39581079-39782830
GeneTranscriptPositionBiotype
ENSG00000137801 (THBS1)
thrombospondin 1 		ENST00000260356 (THBS1-001) 39581093-39599466 protein_coding
ENST00000397591 (THBS1-002) 39581079-39582407 protein_coding
ENST00000466755 (THBS1-005) 39587452-39588472 retained_intron
ENST00000484734 (THBS1-008) 39593045-39595529 retained_intron
ENST00000490247 (THBS1-006) 39588848-39589843 retained_intron
ENST00000497720 (THBS1-007) 39587431-39588785 retained_intron
ENST00000559746 (THBS1-003) 39594068-39595551 retained_intron
ENST00000560894 (THBS1-009) 39590928-39591618 retained_intron
ENSG00000150667 (FSIP1)
fibrous sheath interacting protein 1 		ENST00000350221 (FSIP1-001) 39600031-39782830 protein_coding
ENST00000559547 (FSIP1-003) 39600249-39600926 protein_coding
ENST00000559692 (FSIP1-002) 39739665-39747447 processed_transcript
ENSG00000261136 (RP11-37C7.3)
 ENST00000564211 (RP11-37C7.3-001) 39782571-39785617 antisense
ENSG00000276107 (CTD-2033D15.2)
 ENST00000478845 (CTD-2033D15.2-001) 39586561-39587293 sense_intronic

Homo sapiens Ensembl (GRCh38)

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CIL_0006QV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000040152-ENSMUSG00000027344 CGP 10090 2:118111876-118256966
GeneTranscriptPositionBiotype
ENSMUSG00000027344 (Fsip1)
fibrous sheath-interacting protein 1 		ENSMUST00000028820 (Fsip1-002) 118244664-118256956 protein_coding
ENSMUST00000028821 (Fsip1-001) 118204888-118256966 protein_coding
ENSMUSG00000040152 (Thbs1)
thrombospondin 1 		ENSMUST00000039559 (Thbs1-001) 118111876-118127133 protein_coding
ENSMUST00000142588 (Thbs1-002) 118122940-118123764 processed_transcript

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006QV_0001ENSG00000137801ENST00000260356ENST00000397591ENST00000466755ENST00000484734ENST00000490247ENST00000497720ENST00000559746ENST00000560894ENSG00000150667ENST00000350221ENST00000559547ENST00000559692ENSG00000261136ENST00000564211ENSG00000276107ENST00000478845CIL_0006QV_0002ENSMUSG00000027344ENSMUST00000028820ENSMUST00000028821ENSMUSG00000040152ENSMUST00000039559ENSMUST00000142588
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006QV_0001ENSG00000137801ENST00000260356ENSG00000150667ENST00000350221ENSG00000261136ENST00000564211ENSG00000276107ENST00000478845CIL_0006QV_0002ENSMUSG00000027344ENSMUST00000028820ENSMUST00000028821ENSMUSG00000040152ENSMUST00000039559
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000137801 ENST00000260356 19.375±0.00 N/A 18.397±0.00 0.622±0.00 53.112±0.00 N/A 2.831±0.00 1.337±0.00 15.042±11.46 21.360±0.00 2.652±0.96 26.327±7.67 18.206±14.52 N/A
ENST00000397591 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466755 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484734 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490247 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497720 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559746 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560894 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000150667 ENST00000350221 N/A N/A 0.106±0.00 2.274±0.00 N/A 0.305±0.00 0.105±0.03 0.593±0.00 0.113±0.00 0.325±0.00 0.119±0.00 0.218±0.10 0.211±0.00 5.856±5.05
ENST00000559547 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559692 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000261136 ENST00000564211 N/A N/A 0.152±0.00 N/A N/A N/A N/A 0.222±0.16 0.230±0.00 N/A N/A N/A N/A N/A
ENSG00000276107 ENST00000478845 1.472±0.00 0.841±0.00 3.574±0.00 N/A 2.222±1.97 1.532±0.87 0.375±0.01 0.985±0.90 1.934±1.88 3.012±0.00 1.207±0.00 1.518±0.93 0.447±0.42 0.102±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027344 ENSMUST00000028820 N/A N/A N/A N/A N/A N/A N/A 0.234±0.00 0.087±0.00 0.187±0.00 N/A N/A 0.055±0.01 4.146±0.02
ENSMUST00000028821 N/A N/A N/A 0.938±0.22 N/A N/A 0.061±0.01 0.140±0.00 0.069±0.02 0.401±0.16 N/A 0.970±0.80 0.118±0.03 20.488±17.91
ENSMUSG00000040152 ENSMUST00000039559 18.931±7.30 1.319±0.18 13.445±0.21 1.525±1.18 2.283±0.51 9.307±3.23 2.176±0.89 8.149±0.19 5.487±5.53 11.512±1.13 1.287±0.42 45.271±30.22 7.949±2.08 0.404±0.11
ENSMUST00000142588 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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