C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006RD_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000039456-ENSDARG00000039458 CGP 7955 8:14898223-15001550
GeneTranscriptPositionBiotype
ENSDARG00000039456 (acbd6)
acyl-Coenzyme A binding domain containing 6 		ENSDART00000057642 (acbd6-001) 14898223-14958763 protein_coding
ENSDART00000110151 (acbd6-201) 14898339-14958757 protein_coding
ENSDARG00000039458 (lhx4)
LIM homeobox 4 		ENSDART00000057644 (lhx4-001) 14970884-15001550 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0006RD_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000033701-ENSMUSG00000026468 CGP 10090 1:155558120-155751710
GeneTranscriptPositionBiotype
ENSMUSG00000026468 (Lhx4)
LIM homeobox protein 4 		ENSMUST00000027740 (Lhx4-001) 155698031-155751710 protein_coding
ENSMUSG00000033701 (Acbd6)
acyl-Coenzyme A binding domain containing 6 		ENSMUST00000035560 (Acbd6-001) 155558129-155687233 protein_coding
ENSMUST00000080138 (Acbd6-003) 155558120-155572288 protein_coding
ENSMUST00000097529 (Acbd6-002) 155558126-155587798 protein_coding
ENSMUST00000159339 (Acbd6-004) 155567248-155572259 retained_intron

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006RD_0001ENSDARG00000039456ENSDART00000057642ENSDART00000110151ENSDARG00000039458ENSDART00000057644CIL_0006RD_0002ENSMUSG00000026468ENSMUST00000027740ENSMUSG00000033701ENSMUST00000035560ENSMUST00000080138ENSMUST00000097529ENSMUST00000159339
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006RD_0001ENSDARG00000039456ENSDART00000057642ENSDART00000110151ENSDARG00000039458ENSDART00000057644CIL_0006RD_0002ENSMUSG00000026468ENSMUST00000027740ENSMUSG00000033701ENSMUST00000035560ENSMUST00000080138ENSMUST00000097529
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000039456 ENSDART00000057642 N/A N/A N/A 11.909±5.65 N/A N/A 3.890±2.10 6.474±3.77 0.210±0.00 N/A 1.422±0.00 N/A N/A N/A
ENSDART00000110151 N/A N/A N/A 2.376±0.00 N/A N/A 1.118±0.37 1.614±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000039458 ENSDART00000057644 N/A N/A N/A 0.907±0.35 N/A N/A 0.270±0.23 0.862±0.52 0.016±0.00 N/A 0.100±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026468 ENSMUST00000027740 0.005±0.00 0.011±0.00 0.000±0.00 0.007±0.00 0.007±0.00 0.010±0.00 0.006±0.00 0.003±0.00 0.001±0.00 N/A N/A 0.009±0.01 0.005±0.01 0.022±0.01
ENSMUSG00000033701 ENSMUST00000035560 8.993±1.87 N/A 12.669±0.28 20.938±10.70 8.405±1.75 6.634±1.62 5.638±1.22 10.974±1.45 6.737±3.59 9.352±0.70 3.164±0.52 13.687±4.00 9.817±3.63 85.297±7.99
ENSMUST00000080138 22.508±7.23 103.478±14.57 26.332±7.68 21.470±9.63 44.513±30.35 46.650±3.35 11.460±5.71 27.282±9.76 19.668±5.83 30.510±13.67 21.424±2.18 70.988±29.03 13.606±4.18 N/A
ENSMUST00000097529 N/A N/A N/A N/A 1.317±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 22.218±3.74
ENSMUST00000159339 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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