C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006US_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000017385-ENSDARG00000034895 CGP 7955 21:20499408-20517022
GeneTranscriptPositionBiotype
ENSDARG00000017385 (b9d2)
B9 protein domain 2 		ENSDART00000008099 (b9d2-001) 20499408-20502845 protein_coding
ENSDARG00000034895 (tgfb1b)
transforming growth factor, beta 1b 		ENSDART00000028981 (tgfb1b-201) 20508236-20516759 protein_coding
ENSDART00000134907 (tgfb1b-001) 20508236-20517022 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0006US_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000063439-ENSMUSG00000002603 CGP 10090 7:25681158-25705077
GeneTranscriptPositionBiotype
ENSMUSG00000002603 (Tgfb1)
transforming growth factor, beta 1 		ENSMUST00000002678 (Tgfb1-001) 25687002-25705077 protein_coding
ENSMUST00000169009 (Tgfb1-003) 25688927-25697213 nonsense_mediated_decay
ENSMUST00000171757 (Tgfb1-002) 25692418-25697174 retained_intron
ENSMUSG00000063439 (B9d2)
B9 protein domain 2 		ENSMUST00000108403 (B9d2-201) 25681158-25686558 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006US_0001ENSDARG00000017385ENSDART00000008099ENSDARG00000034895ENSDART00000028981ENSDART00000134907CIL_0006US_0002ENSMUSG00000002603ENSMUST00000002678ENSMUST00000169009ENSMUST00000171757ENSMUSG00000063439ENSMUST00000108403
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006US_0001ENSDARG00000017385ENSDART00000008099ENSDARG00000034895ENSDART00000028981ENSDART00000134907CIL_0006US_0002ENSMUSG00000002603ENSMUST00000002678ENSMUST00000169009ENSMUST00000171757ENSMUSG00000063439ENSMUST00000108403
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000017385 ENSDART00000008099 N/A N/A N/A 1.829±1.58 N/A N/A 1.823±1.32 6.504±4.18 0.182±0.00 N/A 0.924±0.00 N/A N/A N/A
ENSDARG00000034895 ENSDART00000028981 N/A N/A N/A 0.276±0.00 N/A N/A N/A N/A N/A N/A 0.830±0.00 N/A N/A N/A
ENSDART00000134907 N/A N/A N/A 0.256±0.04 N/A N/A 5.098±0.21 10.510±0.00 0.258±0.00 N/A 2.683±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000002603 ENSMUST00000002678 15.242±3.61 17.682±2.15 10.063±1.87 1.713±0.44 28.483±13.52 9.371±2.15 7.312±2.23 8.267±0.94 8.356±7.35 26.007±1.41 1.587±0.78 17.351±2.83 9.424±2.46 2.161±0.94
ENSMUST00000169009 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.604±0.00 0.482±0.00
ENSMUST00000171757 N/A N/A N/A 4.329±0.00 N/A N/A N/A N/A N/A N/A N/A 40.803±0.00 39.703±1.13 1.951±0.00
ENSMUSG00000063439 ENSMUST00000108403 6.115±0.00 23.603±1.77 7.593±0.23 11.214±5.03 12.844±6.78 8.441±2.58 6.732±3.52 16.343±9.02 7.325±5.58 16.050±0.58 N/A 26.840±9.34 3.871±1.27 4.320±2.11

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