C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006VX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000025043-ENSDARG00000055271 CGP 7955 16:56493081-56581107
GeneTranscriptPositionBiotype
ENSDARG00000017143 (brd9)
bromodomain containing 9 		ENSDART00000009256 (brd9-001) 56452408-56493134 protein_coding
ENSDART00000153758 (brd9-002) 56481060-56493080 protein_coding
ENSDARG00000025043 (trip13)
thyroid hormone receptor interactor 13 		ENSDART00000049099 (trip13-001) 56493110-56517756 protein_coding
ENSDART00000148435 (trip13-002) 56493081-56498216 protein_coding
ENSDART00000150117 (trip13-003) 56493112-56508445 protein_coding
ENSDARG00000055271 (nkd2a)
naked cuticle homolog 2a 		ENSDART00000011506 (nkd2a-001) 56526047-56581107 protein_coding
CIL_0006VX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000071539-ENSG00000145506 CGP 9606 5:892643-1038943
GeneTranscriptPositionBiotype
ENSG00000071539 (TRIP13)
thyroid hormone receptor interactor 13 		ENST00000166345 (TRIP13-001) 892643-918120 protein_coding
ENST00000508430 (TRIP13-005) 917028-917900 processed_transcript
ENST00000508456 (TRIP13-007) 893025-896790 processed_transcript
ENST00000509210 (TRIP13-004) 915928-917448 processed_transcript
ENST00000510412 (TRIP13-003) 914559-919357 processed_transcript
ENST00000512024 (TRIP13-002) 892884-908932 retained_intron
ENST00000513435 (TRIP13-006) 893642-908074 protein_coding
ENSG00000145506 (NKD2)
naked cuticle homolog 2 (Drosophila) 		ENST00000274150 (NKD2-002) 1008962-1038682 protein_coding
ENST00000296849 (NKD2-001) 1008829-1038943 protein_coding
ENST00000513296 (NKD2-004) 1035805-1038284 retained_intron
ENST00000519933 (NKD2-005) 1034136-1036172 retained_intron
ENST00000523688 (NKD2-006) 1034756-1038315 retained_intron
ENSG00000215246 (RP11-43F13.3)
 ENST00000399869 (RP11-43F13.3-001) 987180-997308 antisense
ENSG00000248949 (RP11-661C8.2)
 ENST00000507989 (RP11-661C8.2-001) 946315-956520 lincRNA
ENSG00000250173 (RP11-661C8.3)
 ENST00000511936 (RP11-661C8.3-001) 979365-981300 lincRNA
ENSG00000272347 (RP11-43F13.4)
 ENST00000606540 (RP11-43F13.4-001) 1005039-1006623 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006VX_0001ENSDARG00000017143ENSDART00000009256ENSDART00000153758ENSDARG00000025043ENSDART00000049099ENSDART00000148435ENSDART00000150117ENSDARG00000055271ENSDART00000011506CIL_0006VX_0002ENSG00000071539ENST00000166345ENST00000508430ENST00000508456ENST00000509210ENST00000510412ENST00000512024ENST00000513435ENSG00000145506ENST00000274150ENST00000296849ENST00000513296ENST00000519933ENST00000523688ENSG00000215246ENST00000399869ENSG00000248949ENST00000507989ENSG00000250173ENST00000511936ENSG00000272347ENST00000606540
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006VX_0001ENSDARG00000017143ENSDART00000009256ENSDARG00000025043ENSDART00000049099ENSDARG00000055271ENSDART00000011506CIL_0006VX_0002ENSG00000071539ENST00000166345ENSG00000145506ENST00000274150ENST00000296849ENST00000513296ENST00000519933ENST00000523688ENSG00000215246ENST00000399869ENSG00000248949ENST00000507989ENSG00000250173ENST00000511936ENSG00000272347ENST00000606540
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000017143 ENSDART00000009256 N/A N/A N/A 6.945±6.67 N/A N/A 6.118±3.36 10.627±0.00 0.818±0.00 N/A 1.199±0.00 N/A N/A N/A
ENSDART00000153758 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000025043 ENSDART00000049099 N/A N/A N/A N/A N/A N/A N/A 3.979±2.36 N/A N/A N/A N/A N/A N/A
ENSDART00000148435 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000150117 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000055271 ENSDART00000011506 N/A N/A N/A 0.358±0.06 N/A N/A 0.484±0.06 0.562±0.25 N/A N/A 0.038±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000071539 ENST00000166345 N/A N/A N/A N/A N/A 1.280±0.00 N/A N/A N/A 1.152±0.00 N/A 7.589±5.59 1.890±0.41 15.531±0.73
ENST00000508430 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508456 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509210 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510412 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512024 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513435 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000145506 ENST00000274150 0.231±0.00 N/A 0.032±0.00 0.144±0.05 0.415±0.00 0.148±0.08 0.158±0.14 N/A N/A 9.680±0.00 N/A 2.925±2.45 1.707±0.82 2.040±0.53
ENST00000296849 N/A 2.089±0.00 N/A N/A N/A N/A 0.364±0.00 1.706±0.00 0.247±0.00 0.237±0.00 N/A 2.023±0.00 1.514±0.00 1.138±0.17
ENST00000513296 N/A N/A 0.218±0.00 0.518±0.00 0.182±0.00 N/A 0.166±0.00 N/A N/A N/A N/A 5.615±5.09 0.762±0.00 2.204±0.00
ENST00000519933 0.343±0.00 N/A N/A 0.441±0.00 0.503±0.00 0.320±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523688 N/A N/A N/A N/A 0.072±0.00 0.719±0.00 N/A 0.090±0.00 N/A 0.318±0.00 N/A 1.295±0.00 2.773±0.92 2.016±0.00
ENSG00000215246 ENST00000399869 0.064±0.00 0.601±0.00 0.383±0.00 0.222±0.00 0.185±0.00 0.114±0.03 1.495±1.13 0.588±0.00 0.101±0.00 0.120±0.03 0.113±0.00 0.320±0.12 0.602±0.45 0.356±0.10
ENSG00000248949 ENST00000507989 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.328±0.00 N/A N/A N/A 0.224±0.17
ENSG00000250173 ENST00000511936 N/A N/A N/A N/A N/A N/A N/A 0.135±0.00 N/A N/A N/A N/A N/A 0.205±0.00
ENSG00000272347 ENST00000606540 0.145±0.00 0.858±0.00 N/A 0.021±0.00 0.058±0.00 0.136±0.00 0.121±0.00 0.150±0.00 N/A 0.342±0.30 N/A 0.423±0.16 0.189±0.07 0.838±0.24

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