C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006W8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000074126-ENSDARG00000078216 CGP 7955 8:16989758-17078641
GeneTranscriptPositionBiotype
ENSDARG00000074126 (ttc39a)
tetratricopeptide repeat domain 39A 		ENSDART00000108659 (ttc39a-201) 16990392-17034358 protein_coding
ENSDART00000132681 (ttc39a-002) 17005696-17034527 protein_coding
ENSDART00000146469 (ttc39a-001) 16989758-17034527 protein_coding
ENSDARG00000078216 (eps15)
epidermal growth factor receptor pathway substrate 15 		ENSDART00000098692 (eps15-201) 17036170-17078581 protein_coding
ENSDART00000124257 (eps15-001) 17038612-17078641 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0006W8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000085831-ENSG00000085832 CGP 9606 1:51287258-51519328
GeneTranscriptPositionBiotype
ENSG00000085831 (TTC39A)
tetratricopeptide repeat domain 39A 		ENST00000262675 (TTC39A-017) 51287812-51330173 protein_coding
ENST00000262676 (TTC39A-002) 51297218-51331346 protein_coding
ENST00000371747 (TTC39A-003) 51295538-51330562 protein_coding
ENST00000371750 (TTC39A-005) 51287970-51322258 protein_coding
ENST00000380849 (TTC39A-007) 51306024-51330202 protein_coding
ENST00000401051 (TTC39A-010) 51309392-51345116 protein_coding
ENST00000411642 (TTC39A-012) 51301705-51330947 protein_coding
ENST00000413473 (TTC39A-001) 51287258-51345116 protein_coding
ENST00000422925 (TTC39A-008) 51303084-51325976 protein_coding
ENST00000431927 (TTC39A-009) 51294458-51305593 processed_transcript
ENST00000439482 (TTC39A-006) 51302357-51330564 protein_coding
ENST00000447632 (TTC39A-004) 51287258-51322210 protein_coding
ENST00000524442 (TTC39A-016) 51301393-51303158 processed_transcript
ENST00000525906 (TTC39A-018) 51290092-51296860 protein_coding
ENST00000527205 (TTC39A-011) 51311257-51345116 protein_coding
ENST00000530004 (TTC39A-013) 51287258-51297990 protein_coding
ENST00000532836 (TTC39A-015) 51309399-51325953 protein_coding
ENST00000534098 (TTC39A-014) 51287986-51297960 processed_transcript
ENSG00000227070 (RP11-191G24.1)
 ENST00000415031 (RP11-191G24.1-002) 51518309-51560961 antisense
ENST00000426017 (RP11-191G24.1-001) 51518383-51561629 antisense
ENSG00000232027 (RP11-275F13.3)
 ENST00000422197 (RP11-275F13.3-001) 51372270-51373224 processed_pseudogene
ENSG00000238140 (RP11-253A20.1)
 ENST00000424246 (RP11-253A20.1-001) 51461721-51463416 antisense

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006W8_0001ENSDARG00000074126ENSDART00000108659ENSDART00000132681ENSDART00000146469ENSDARG00000078216ENSDART00000098692ENSDART00000124257CIL_0006W8_0002ENSG00000085831ENST00000262675ENST00000262676ENST00000371747ENST00000371750ENST00000380849ENST00000401051ENST00000411642ENST00000413473ENST00000422925ENST00000431927ENST00000439482ENST00000447632ENST00000524442ENST00000525906ENST00000527205ENST00000530004ENST00000532836ENST00000534098ENSG00000227070ENST00000415031ENST00000426017ENSG00000232027ENST00000422197ENSG00000238140ENST00000424246
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006W8_0001ENSDARG00000074126ENSDART00000108659ENSDART00000132681ENSDART00000146469ENSDARG00000078216ENSDART00000098692ENSDART00000124257CIL_0006W8_0002ENSG00000085831ENST00000262675ENST00000262676ENST00000371750ENST00000380849ENST00000413473ENST00000422925ENST00000431927ENST00000439482ENST00000524442ENST00000525906ENST00000530004ENST00000534098ENSG00000227070ENST00000415031ENST00000426017ENSG00000232027ENST00000422197ENSG00000238140ENST00000424246
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000074126 ENSDART00000108659 N/A N/A N/A N/A N/A N/A N/A N/A 0.024±0.00 N/A N/A N/A N/A N/A
ENSDART00000132681 N/A N/A N/A N/A N/A N/A 0.055±0.00 N/A 0.045±0.00 N/A N/A N/A N/A N/A
ENSDART00000146469 N/A N/A N/A 0.079±0.02 N/A N/A 0.063±0.00 0.530±0.00 N/A N/A 0.308±0.00 N/A N/A N/A
ENSDARG00000078216 ENSDART00000098692 N/A N/A N/A 3.077±0.00 N/A N/A 1.344±0.00 N/A 0.314±0.00 N/A 0.836±0.00 N/A N/A N/A
ENSDART00000124257 N/A N/A N/A N/A N/A N/A 0.859±0.00 N/A N/A N/A 1.016±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000085831 ENST00000262675 N/A 0.230±0.00 N/A N/A N/A N/A 1.903±0.00 N/A N/A N/A N/A 2.710±0.00 N/A N/A
ENST00000262676 N/A 0.109±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.151±0.00 0.039±0.03 N/A
ENST00000371747 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000371750 N/A N/A N/A N/A N/A 1.772±0.00 N/A N/A N/A 1.554±0.00 N/A 0.891±0.61 N/A 11.901±0.00
ENST00000380849 N/A N/A N/A N/A N/A N/A N/A 0.177±0.00 N/A N/A N/A N/A N/A N/A
ENST00000401051 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000411642 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000413473 N/A N/A N/A 0.601±0.00 N/A 1.024±0.00 2.676±0.00 14.350±0.00 N/A 0.485±0.00 0.517±0.00 N/A 0.095±0.00 N/A
ENST00000422925 N/A N/A N/A N/A N/A N/A N/A N/A 0.211±0.00 N/A N/A N/A 0.242±0.00 N/A
ENST00000431927 N/A N/A N/A N/A 6.625±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000439482 N/A N/A N/A 1.222±0.00 N/A N/A N/A N/A N/A N/A N/A 4.721±0.00 N/A 28.142±0.00
ENST00000447632 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524442 N/A N/A N/A N/A N/A N/A N/A N/A 1.565±0.00 N/A N/A N/A N/A N/A
ENST00000525906 0.568±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.754±0.00 0.350±0.00 43.155±0.00
ENST00000527205 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530004 0.136±0.00 N/A N/A N/A 2.837±0.00 N/A 0.565±0.16 5.659±0.00 N/A N/A N/A 0.426±0.00 0.102±0.07 N/A
ENST00000532836 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534098 0.168±0.00 N/A N/A N/A N/A N/A 0.767±0.00 N/A N/A N/A 0.875±0.00 1.220±0.00 0.190±0.01 11.708±0.00
ENSG00000227070 ENST00000415031 0.483±0.00 N/A N/A 0.730±0.00 0.120±0.00 N/A 0.197±0.00 0.753±0.41 0.425±0.00 0.689±0.00 0.284±0.00 0.457±0.12 0.522±0.00 0.555±0.00
ENST00000426017 N/A 0.131±0.00 N/A N/A N/A N/A N/A N/A 0.316±0.00 N/A N/A 0.112±0.00 0.071±0.00 0.426±0.13
ENSG00000232027 ENST00000422197 0.025±0.00 0.157±0.00 0.501±0.00 0.013±0.00 0.277±0.20 0.303±0.28 0.146±0.05 0.051±0.00 N/A 0.288±0.23 0.011±0.00 0.112±0.00 0.041±0.00 0.182±0.14
ENSG00000238140 ENST00000424246 0.031±0.00 0.060±0.00 0.479±0.00 0.030±0.00 0.028±0.00 N/A 0.115±0.00 0.044±0.00 0.434±0.00 0.539±0.00 0.383±0.00 0.054±0.03 N/A 0.056±0.02

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