C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006W9_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000023701-ENSDARG00000075120 CGP 7955 2:19097762-19215707
GeneTranscriptPositionBiotype
ENSDARG00000023701 (zfyve9a)
zinc finger, FYVE domain containing 9a 		ENSDART00000031837 (zfyve9a-201) 19131620-19171555 protein_coding
ENSDART00000132283 (zfyve9a-001) 19097762-19171555 protein_coding
ENSDARG00000075120 (cc2d1b)
coiled-coil and C2 domain containing 1B 		ENSDART00000109504 (cc2d1b-201) 19182041-19215050 protein_coding
ENSDART00000155435 (cc2d1b-002) 19209040-19215021 retained_intron
ENSDART00000156339 (cc2d1b-001) 19177719-19215707 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0006W9_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000157077-ENSG00000154222 CGP 9606 1:52142094-52366193
GeneTranscriptPositionBiotype
ENSG00000154222 (CC2D1B)
coiled-coil and C2 domain containing 1B 		ENST00000284376 (CC2D1B-003) 52352532-52366179 protein_coding
ENST00000371586 (CC2D1B-001) 52350593-52366193 protein_coding
ENST00000438021 (CC2D1B-002) 52352538-52360196 protein_coding
ENST00000450942 (CC2D1B-004) 52353519-52360548 protein_coding
ENST00000460261 (CC2D1B-007) 52353089-52361100 processed_transcript
ENST00000460370 (CC2D1B-010) 52353531-52355666 retained_intron
ENST00000470844 (CC2D1B-012) 52345723-52354865 processed_transcript
ENST00000485966 (CC2D1B-009) 52354887-52356560 retained_intron
ENST00000491136 (CC2D1B-005) 52352532-52366156 retained_intron
ENST00000492426 (CC2D1B-011) 52354655-52354965 retained_intron
ENST00000494789 (CC2D1B-008) 52356255-52356813 processed_transcript
ENSG00000157077 (ZFYVE9)
zinc finger, FYVE domain containing 9 		ENST00000287727 (ZFYVE9-201) 52142094-52346685 protein_coding
ENST00000357206 (ZFYVE9-002) 52142374-52346515 protein_coding
ENST00000361625 (ZFYVE9-003) 52142374-52264047 retained_intron
ENST00000371591 (ZFYVE9-001) 52216380-52346686 protein_coding
ENST00000469134 (ZFYVE9-004) 52295895-52335207 processed_transcript
ENSG00000213735 (ANAPC10P1)
anaphase promoting complex subunit 10 pseudogene 1 		ENST00000395991 (ANAPC10P1-001) 52253621-52254176 processed_pseudogene
ENSG00000223429 (RP4-800M22.2)
 ENST00000412785 (RP4-800M22.2-001) 52162186-52163026 processed_pseudogene
ENSG00000224255 (PDCL3P6)
phosducin-like 3 pseudogene 6 		ENST00000429744 (PDCL3P6-001) 52179848-52180553 processed_pseudogene
ENSG00000228407 (RP4-800M22.1)
 ENST00000414059 (RP4-800M22.1-001) 52160261-52160600 processed_pseudogene
ENSG00000236004 (RP4-800M22.4)
 ENST00000454802 (RP4-800M22.4-001) 52189916-52190309 processed_pseudogene
ENSG00000237663 (DNAJC19P7)
DnaJ (Hsp40) homolog, subfamily C, member 19 pseudogene 7 		ENST00000428811 (DNAJC19P7-001) 52252062-52252773 processed_pseudogene
ENSG00000241745 (RN7SL788P)
RNA, 7SL, cytoplasmic 788, pseudogene 		ENST00000460504 (RN7SL788P-201) 52150104-52150419 misc_RNA

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006W9_0001ENSDARG00000023701ENSDART00000031837ENSDART00000132283ENSDARG00000075120ENSDART00000109504ENSDART00000155435ENSDART00000156339CIL_0006W9_0002ENSG00000154222ENST00000284376ENST00000371586ENST00000438021ENST00000450942ENST00000460261ENST00000460370ENST00000470844ENST00000485966ENST00000491136ENST00000492426ENST00000494789ENSG00000157077ENST00000287727ENST00000357206ENST00000361625ENST00000371591ENST00000469134ENSG00000213735ENST00000395991ENSG00000223429ENST00000412785ENSG00000224255ENST00000429744ENSG00000228407ENST00000414059ENSG00000236004ENST00000454802ENSG00000237663ENST00000428811ENSG00000241745ENST00000460504
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006W9_0001ENSDARG00000023701ENSDART00000031837ENSDART00000132283ENSDARG00000075120ENSDART00000109504ENSDART00000155435ENSDART00000156339CIL_0006W9_0002ENSG00000154222ENST00000284376ENST00000371586ENST00000438021ENST00000491136ENSG00000157077ENST00000287727ENST00000357206ENST00000361625ENST00000371591ENSG00000213735ENST00000395991ENSG00000223429ENST00000412785ENSG00000224255ENST00000429744ENSG00000228407ENST00000414059ENSG00000236004ENST00000454802ENSG00000237663ENST00000428811ENSG00000241745ENST00000460504
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000023701 ENSDART00000031837 N/A N/A N/A 1.969±0.00 N/A N/A 1.541±1.50 1.900±0.54 0.114±0.00 N/A 0.395±0.00 N/A N/A N/A
ENSDART00000132283 N/A N/A N/A 3.188±0.02 N/A N/A 1.346±0.90 3.021±0.00 0.088±0.00 N/A 0.344±0.00 N/A N/A N/A
ENSDARG00000075120 ENSDART00000109504 N/A N/A N/A N/A N/A N/A N/A 1.131±0.00 0.168±0.00 N/A N/A N/A N/A N/A
ENSDART00000155435 N/A N/A N/A N/A N/A N/A 0.895±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000156339 N/A N/A N/A 2.052±0.10 N/A N/A 1.652±0.93 0.987±0.50 0.426±0.00 N/A 0.912±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000154222 ENST00000284376 5.650±0.00 N/A 1.750±0.00 N/A 3.607±1.70 5.389±0.00 2.318±1.52 8.256±0.00 2.022±0.00 9.661±0.00 16.497±0.00 6.015±3.29 7.961±0.89 13.536±1.06
ENST00000371586 1.525±0.00 2.562±0.00 0.483±0.00 N/A 1.399±0.48 0.979±0.00 N/A 2.006±0.89 1.340±0.00 1.321±0.00 N/A 1.773±0.00 N/A N/A
ENST00000438021 N/A N/A N/A N/A N/A N/A N/A N/A 2.383±0.00 N/A 9.321±0.00 N/A 3.009±0.00 N/A
ENST00000450942 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460261 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460370 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470844 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485966 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491136 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.285±0.00 N/A N/A
ENST00000492426 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494789 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000157077 ENST00000287727 1.554±0.00 N/A N/A N/A 1.472±0.00 1.052±0.00 1.863±1.33 2.097±0.55 2.339±0.59 3.367±0.22 N/A 3.533±1.29 2.664±1.17 6.981±0.00
ENST00000357206 N/A N/A 0.955±0.00 4.695±1.31 N/A N/A 0.989±0.00 N/A 2.849±0.00 N/A N/A N/A N/A 4.727±0.00
ENST00000361625 N/A N/A N/A N/A 1.430±0.00 N/A 0.886±0.00 1.084±0.00 2.760±0.00 N/A N/A N/A N/A N/A
ENST00000371591 2.770±0.00 2.369±0.00 0.490±0.00 7.692±0.00 3.556±0.00 3.224±1.55 1.400±0.00 3.301±0.00 N/A 1.968±0.00 4.455±1.51 3.851±0.86 2.369±0.46 10.299±0.00
ENST00000469134 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000213735 ENST00000395991 0.142±0.00 N/A 0.666±0.00 0.041±0.00 0.182±0.12 N/A N/A N/A N/A N/A 0.500±0.00 0.212±0.00 N/A N/A
ENSG00000223429 ENST00000412785 N/A N/A N/A 0.080±0.01 0.109±0.00 0.145±0.00 0.029±0.00 N/A 0.180±0.00 N/A N/A 0.029±0.00 N/A N/A
ENSG00000224255 ENST00000429744 N/A N/A 0.833±0.00 0.177±0.00 0.178±0.09 N/A 0.048±0.02 N/A 0.245±0.00 N/A N/A 0.104±0.06 0.127±0.00 0.197±0.15
ENSG00000228407 ENST00000414059 N/A 0.208±0.00 N/A 0.371±0.00 0.363±0.00 N/A 0.037±0.00 N/A 0.036±0.00 N/A 0.292±0.00 0.517±0.12 0.175±0.00 0.213±0.14
ENSG00000236004 ENST00000454802 0.029±0.00 N/A N/A 0.029±0.00 0.083±0.00 0.026±0.00 N/A N/A N/A N/A 0.026±0.00 N/A N/A 0.065±0.00
ENSG00000237663 ENST00000428811 N/A N/A N/A N/A N/A N/A N/A 2.790±0.00 N/A N/A N/A N/A N/A 0.245±0.00
ENSG00000241745 ENST00000460504 N/A 0.127±0.00 N/A 1.004±0.00 0.586±0.25 0.811±0.00 N/A N/A 0.299±0.00 N/A N/A N/A N/A N/A

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