C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coiled-coil and C2 domain containing 1B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000371586 CC2D1B-001 ENSG00000154222 9606 - 1:52350593-52366193 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonKidneyLiverLungOvaryENST00000371586
Transcript ID Adipose Adrenal Bladder Breast Colon Kidney Liver Lung Ovary
ENST00000371586 1.525±0.00 2.562±0.00 0.483±0.00 1.399±0.48 0.979±0.00 2.006±0.89 1.340±0.00 1.321±0.00 1.773±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006W9 CIL_0006W9_0002 CGP 1:52142094-52366193

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0000978 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001078 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030320 Cc2d1b-001 protein_coding Mus_musculus 0 2422
ENSMUST00000134844 Cc2d1b-002 protein_coding Mus_musculus 0 1777
ENSMUST00000106665 Cc2d1b-003 retained_intron Mus_musculus 0 1308
ENSMUST00000143336 Cc2d1b-008 retained_intron Mus_musculus 0 412
ENSMUST00000176877 Cc2d1b-009 processed_transcript Mus_musculus 0 303
ENSMUST00000126156 Cc2d1b-007 retained_intron Mus_musculus 6e-27 128

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