C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006ZC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000142197-ENSG00000159256 CGP 9606 21:36156782-36386148
GeneTranscriptPositionBiotype
ENSG00000159256 (MORC3)
MORC family CW-type zinc finger 3 		ENST00000400485 (MORC3-001) 36320189-36376646 protein_coding
ENST00000484028 (MORC3-005) 36361836-36369115 retained_intron
ENST00000485299 (MORC3-004) 36347872-36360049 processed_transcript
ENST00000485933 (MORC3-006) 36333419-36336990 retained_intron
ENST00000487909 (MORC3-002) 36320231-36376646 processed_transcript
ENST00000492336 (MORC3-003) 36320189-36339527 retained_intron
ENST00000546482 (MORC3-007) 36369611-36386148 nonsense_mediated_decay
ENST00000547657 (MORC3-012) 36369611-36386148 processed_transcript
ENST00000549948 (MORC3-008) 36369611-36386148 nonsense_mediated_decay
ENST00000551367 (MORC3-010) 36369611-36386148 processed_transcript
ENST00000551788 (MORC3-009) 36369611-36386148 nonsense_mediated_decay
ENST00000552581 (MORC3-011) 36369611-36386148 nonsense_mediated_decay
ENSG00000159259 (CHAF1B)
chromatin assembly factor 1, subunit B (p60) 		ENST00000314103 (CHAF1B-001) 36385378-36419015 protein_coding
ENST00000480486 (CHAF1B-003) 36386060-36398239 processed_transcript
ENST00000481458 (CHAF1B-002) 36399502-36412962 processed_transcript
ENSG00000214867 (SRSF9P1)
serine/arginine-rich splicing factor 9 pseudogene 1 		ENST00000399149 (SRSF9P1-001) 36295173-36295702 processed_pseudogene
ENSG00000228149 (RPL3P1)
ribosomal protein L3 pseudogene 1 		ENST00000437106 (RPL3P1-001) 36168970-36170180 processed_pseudogene
CIL_0006ZC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022946-ENSMUSG00000039456 CGP 10090 16:93711907-93876072
GeneTranscriptPositionBiotype
ENSMUSG00000022946 (Dopey2)
dopey family member 2 		ENSMUST00000045004 (Dopey2-201) 93711907-93810585 protein_coding
ENSMUSG00000039456 (Morc3)
microrchidia 3 		ENSMUST00000044068 (Morc3-201) 93832121-93876072 protein_coding
ENSMUSG00000097768 (2310043M15Rik)
RIKEN cDNA 2310043M15 gene 		ENSMUST00000180967 (2310043M15Rik-201) 93792150-93794888 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006ZC_0001ENSG00000159256ENST00000400485ENST00000484028ENST00000485299ENST00000485933ENST00000487909ENST00000492336ENST00000546482ENST00000547657ENST00000549948ENST00000551367ENST00000551788ENST00000552581ENSG00000159259ENST00000314103ENST00000480486ENST00000481458ENSG00000214867ENST00000399149ENSG00000228149ENST00000437106CIL_0006ZC_0002ENSMUSG00000022946ENSMUST00000045004ENSMUSG00000039456ENSMUST00000044068ENSMUSG00000097768ENSMUST00000180967
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006ZC_0001ENSG00000159256ENST00000400485ENST00000487909ENST00000551367ENST00000551788ENSG00000159259ENST00000314103ENSG00000214867ENST00000399149ENSG00000228149ENST00000437106CIL_0006ZC_0002ENSMUSG00000022946ENSMUST00000045004ENSMUSG00000039456ENSMUST00000044068ENSMUSG00000097768ENSMUST00000180967
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000159256 ENST00000400485 1.756±0.00 1.584±0.00 N/A 2.857±0.00 3.028±0.00 3.282±2.44 2.437±0.45 3.010±2.12 0.292±0.00 2.640±0.00 2.206±0.00 3.196±0.74 2.704±0.55 2.429±0.19
ENST00000484028 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485299 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485933 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487909 3.083±0.00 4.431±0.00 2.202±0.00 4.241±0.58 3.796±0.83 4.444±0.00 1.641±0.00 4.531±0.00 4.471±3.66 3.101±0.00 3.338±0.29 3.347±1.11 1.955±0.17 5.177±1.20
ENST00000492336 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000546482 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547657 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549948 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551367 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.349±0.00 15.222±0.00
ENST00000551788 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.813±0.00 4.174±0.00 N/A
ENST00000552581 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000159259 ENST00000314103 1.062±0.00 2.036±0.00 N/A 2.448±0.00 N/A N/A N/A N/A N/A N/A 3.618±0.00 3.724±2.03 1.470±0.58 3.640±1.44
ENST00000480486 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481458 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000214867 ENST00000399149 N/A 0.041±0.00 N/A 0.045±0.00 0.392±0.00 0.314±0.00 0.038±0.00 0.215±0.00 0.422±0.00 0.084±0.00 N/A 0.136±0.05 N/A 0.132±0.00
ENSG00000228149 ENST00000437106 0.190±0.00 0.161±0.00 0.335±0.00 0.166±0.03 0.173±0.00 0.154±0.04 0.014±0.00 0.184±0.00 0.088±0.00 0.083±0.00 0.041±0.00 0.062±0.04 0.023±0.00 0.071±0.05
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022946 ENSMUST00000045004 6.827±1.16 4.049±0.43 5.112±0.48 10.217±2.51 7.612±1.34 17.374±1.42 2.480±0.46 2.821±0.46 4.613±0.84 13.377±1.87 4.202±0.74 6.778±2.01 3.953±1.24 2.722±1.29
ENSMUSG00000039456 ENSMUST00000044068 5.746±1.47 2.250±0.40 7.473±2.04 8.241±1.51 3.478±1.59 4.592±0.59 2.248±0.58 3.190±0.62 5.954±3.88 5.829±0.82 2.023±0.23 6.799±1.89 7.026±1.73 7.613±1.16
ENSMUSG00000097768 ENSMUST00000180967 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.008±0.55 N/A N/A

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