C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00072C_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000141219-ENSG00000187959 CGP 9606 17:73232233-73262352
GeneTranscriptPositionBiotype
ENSG00000133193 (FAM104A)
family with sequence similarity 104, member A 		ENST00000403627 (FAM104A-002) 73207353-73232367 protein_coding
ENST00000405159 (FAM104A-001) 73207353-73232371 protein_coding
ENST00000579872 (FAM104A-005) 73209575-73227700 protein_coding
ENST00000580032 (FAM104A-007) 73209508-73227748 protein_coding
ENST00000581110 (FAM104A-004) 73209566-73232394 protein_coding
ENST00000583024 (FAM104A-006) 73209605-73232320 protein_coding
ENST00000583178 (FAM104A-003) 73209488-73236753 processed_transcript
ENSG00000265010 (RP11-661C3.2)
 ENST00000579037 (RP11-661C3.2-001) 73243093-73244706 sense_intronic
CIL_00072C_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000041623-ENSMUSG00000018727 CGP 10090 11:113684412-113710017
GeneTranscriptPositionBiotype
ENSMUSG00000018727 (Cpsf4l)
cleavage and polyadenylation specific factor 4-like 		ENSMUST00000018871 (Cpsf4l-001) 113698172-113710017 protein_coding
ENSMUST00000100248 (Cpsf4l-201) 113698172-113709526 protein_coding
ENSMUST00000106617 (Cpsf4l-003) 113698172-113708967 protein_coding
ENSMUST00000151396 (Cpsf4l-004) 113702712-113709524 retained_intron
ENSMUST00000173655 (Cpsf4l-002) 113698172-113709520 protein_coding
ENSMUSG00000041623 (D11Wsu47e)
DNA segment, Chr 11, Wayne State University 47, expressed 		ENSMUST00000042227 (D11Wsu47e-002) 113684412-113694647 protein_coding
ENSMUST00000106621 (D11Wsu47e-001) 113684447-113694647 protein_coding
ENSMUST00000123466 (D11Wsu47e-003) 113684440-113688213 protein_coding
ENSMUST00000153732 (D11Wsu47e-004) 113685086-113688128 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00072C_0001ENSG00000133193ENST00000403627ENST00000405159ENST00000579872ENST00000580032ENST00000581110ENST00000583024ENST00000583178ENSG00000265010ENST00000579037CIL_00072C_0002ENSMUSG00000018727ENSMUST00000018871ENSMUST00000100248ENSMUST00000106617ENSMUST00000151396ENSMUST00000173655ENSMUSG00000041623ENSMUST00000042227ENSMUST00000106621ENSMUST00000123466ENSMUST00000153732
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00072C_0001ENSG00000133193ENST00000403627ENST00000405159ENSG00000265010ENST00000579037CIL_00072C_0002ENSMUSG00000018727ENSMUST00000018871ENSMUST00000100248ENSMUST00000106617ENSMUST00000151396ENSMUST00000173655ENSMUSG00000041623ENSMUST00000042227ENSMUST00000106621ENSMUST00000123466ENSMUST00000153732
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000133193 ENST00000403627 10.149±0.00 10.176±0.00 N/A 10.571±0.00 9.916±0.00 6.057±0.00 3.304±1.93 3.907±2.48 2.785±0.00 3.336±1.41 6.598±0.00 9.164±1.19 12.838±2.73 22.190±0.00
ENST00000405159 N/A 5.455±0.00 0.975±0.00 N/A 2.870±0.00 N/A N/A N/A 1.715±0.00 2.886±0.00 N/A N/A 4.308±0.00 33.215±4.37
ENST00000579872 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580032 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581110 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583024 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583178 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000265010 ENST00000579037 N/A 0.600±0.00 N/A 0.206±0.00 0.298±0.00 0.176±0.00 0.037±0.00 0.234±0.00 0.034±0.00 0.099±0.00 N/A 0.113±0.00 N/A 0.258±0.03
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000018727 ENSMUST00000018871 N/A N/A N/A N/A N/A N/A 0.071±0.00 0.622±0.00 N/A N/A 0.043±0.00 N/A 0.367±0.26 9.035±0.00
ENSMUST00000100248 N/A N/A 0.261±0.05 0.283±0.06 0.657±0.00 N/A 0.061±0.00 1.228±0.35 0.274±0.16 N/A 0.061±0.00 3.325±1.10 0.615±0.09 9.434±1.19
ENSMUST00000106617 N/A N/A N/A N/A 1.386±0.00 N/A N/A 1.575±0.50 0.219±0.12 N/A 0.059±0.00 N/A 0.205±0.00 N/A
ENSMUST00000151396 N/A N/A 0.585±0.01 1.182±0.09 N/A N/A 0.131±0.00 N/A 0.277±0.06 N/A 0.222±0.12 1.764±0.00 0.382±0.15 N/A
ENSMUST00000173655 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.890±0.61 N/A 7.289±0.00
ENSMUSG00000041623 ENSMUST00000042227 1.036±0.03 1.145±0.46 2.025±0.49 2.822±1.41 1.533±0.23 1.127±0.65 0.437±0.04 1.337±0.65 1.635±0.91 1.328±0.68 0.302±0.15 1.671±0.33 2.934±1.44 21.637±0.00
ENSMUST00000106621 3.064±0.96 N/A 2.081±0.07 5.393±1.01 0.715±0.24 1.109±0.44 0.600±0.31 1.076±0.48 1.720±0.96 0.820±0.24 0.638±0.32 3.263±1.67 3.108±0.96 105.001±6.89
ENSMUST00000123466 N/A N/A N/A 2.160±0.00 N/A N/A N/A N/A N/A N/A N/A 3.498±0.00 N/A N/A
ENSMUST00000153732 N/A N/A N/A 2.488±0.00 N/A N/A N/A N/A N/A N/A N/A 6.358±1.76 4.341±1.69 156.049±0.00

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