C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00072X_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000078201-ENSDARG00000063191 CGP 7955 2:6811661-6836515
GeneTranscriptPositionBiotype
ENSDARG00000063191 (extl2)
exotoses (multiple)-like 2
ENSDART00000092116 (extl2-001) 6828061-6836515 protein_coding
ENSDARG00000078201 (si:dkey-60b12.4)
vascular cell adhesion molecule 1
ENSDART00000113283 (si:dkey-60b12.4-201) 6814119-6818734 protein_coding
ENSDART00000138691 (si:dkey-60b12.4-001) 6811661-6818735 protein_coding
CIL_00072X_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000162692-ENSG00000162694 CGP 9606 1:100719742-100895998
GeneTranscriptPositionBiotype
ENSG00000162692 (VCAM1)
vascular cell adhesion molecule 1
ENST00000294728 (VCAM1-001) 100719760-100739045 protein_coding
ENST00000347652 (VCAM1-002) 100719755-100739045 protein_coding
ENST00000370115 (VCAM1-003) 100719764-100739038 protein_coding
ENST00000370119 (VCAM1-004) 100719742-100738613 protein_coding
ENST00000603679 (VCAM1-005) 100735175-100739039 retained_intron
ENSG00000162694 (EXTL2)
exostosin-like glycosyltransferase 2
ENST00000370113 (EXTL2-002) 100872387-100894812 protein_coding
ENST00000370114 (EXTL2-001) 100872387-100895998 protein_coding
ENST00000416479 (EXTL2-003) 100877519-100894811 protein_coding
ENST00000450240 (EXTL2-004) 100874160-100894664 protein_coding
ENST00000480774 (EXTL2-006) 100888324-100894805 processed_transcript
ENST00000494907 (EXTL2-005) 100885598-100894681 processed_transcript
ENST00000535414 (EXTL2-201) 100872372-100895179 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00072X_0001ENSDARG00000063191ENSDART00000092116ENSDARG00000078201ENSDART00000113283ENSDART00000138691CIL_00072X_0002ENSG00000162692ENST00000294728ENST00000347652ENST00000370115ENST00000370119ENST00000603679ENSG00000162694ENST00000370113ENST00000370114ENST00000416479ENST00000450240ENST00000480774ENST00000494907ENST00000535414
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00072X_0001ENSDARG00000063191ENSDART00000092116ENSDARG00000078201ENSDART00000113283ENSDART00000138691CIL_00072X_0002ENSG00000162692ENST00000294728ENST00000347652ENST00000370115ENST00000370119ENST00000603679ENSG00000162694ENST00000370113ENST00000370114ENST00000416479ENST00000450240ENST00000480774ENST00000494907ENST00000535414
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000063191 ENSDART00000092116 N/A N/A N/A 0.388±0.22 N/A N/A 2.123±0.42 3.078±0.75 1.001±0.00 N/A 0.232±0.00 N/A N/A N/A
ENSDARG00000078201 ENSDART00000113283 N/A N/A N/A 0.320±0.00 N/A N/A 0.200±0.06 0.110±0.00 0.042±0.00 N/A N/A N/A N/A N/A
ENSDART00000138691 N/A N/A N/A 0.658±0.20 N/A N/A 0.160±0.12 0.413±0.00 N/A N/A 0.444±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000162692 ENST00000294728 3.565±0.00 45.448±0.00 5.250±0.00 2.893±0.00 4.710±1.45 3.366±1.28 0.673±0.37 20.155±12.06 5.277±0.74 27.163±0.00 1.532±0.00 9.655±5.53 8.808±1.86 4.692±3.56
ENST00000347652 N/A N/A 1.134±0.00 0.214±0.00 N/A 0.823±0.00 N/A 3.271±0.00 N/A N/A N/A 3.345±0.00 N/A N/A
ENST00000370115 N/A N/A N/A 0.440±0.00 N/A N/A N/A N/A N/A N/A 0.345±0.00 N/A N/A N/A
ENST00000370119 1.728±0.00 N/A 1.196±0.00 N/A N/A N/A N/A N/A N/A 6.664±2.63 N/A 1.891±0.91 4.760±2.00 0.559±0.00
ENST00000603679 N/A N/A N/A 0.125±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000162694 ENST00000370113 0.813±0.00 1.766±0.00 0.454±0.00 6.348±0.83 1.214±0.12 2.410±0.57 0.965±0.51 3.622±0.00 1.136±0.52 2.144±0.33 0.777±0.28 3.772±2.27 7.925±4.18 4.925±0.00
ENST00000370114 N/A 0.469±0.00 N/A 1.250±0.27 0.460±0.19 N/A 0.445±0.00 N/A N/A N/A 0.087±0.00 0.970±0.00 0.516±0.00 0.969±0.00
ENST00000416479 N/A N/A N/A N/A 1.583±0.00 3.165±0.00 1.030±0.00 0.898±0.00 N/A 2.323±0.00 N/A 4.152±0.00 N/A N/A
ENST00000450240 N/A N/A 1.729±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480774 N/A N/A N/A N/A N/A N/A N/A 1.355±0.00 N/A N/A 1.788±0.00 N/A N/A N/A
ENST00000494907 N/A N/A N/A N/A N/A N/A N/A 1.171±0.00 N/A N/A N/A N/A N/A N/A
ENST00000535414 N/A N/A N/A N/A N/A 0.882±0.00 0.466±0.00 N/A N/A 0.364±0.00 N/A N/A N/A N/A

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