C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007CX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000100142-ENSG00000100142 CGP 9606 22:37952607-38041915
GeneTranscriptPositionBiotype
ENSG00000222044 (RP5-1039K5.16)
 ENST00000410099 (RP5-1039K5.16-001) 38032165-38034228 antisense
ENSG00000279010 (MIR4534)
microRNA 6820 		ENST00000623111 (MIR4534-001) 37948352-38002889 sense_overlapping

Homo sapiens Ensembl (GRCh38)

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CIL_0007CX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000033020-ENSMUSG00000033006 CGP 10090 15:79141351-79164490
GeneTranscriptPositionBiotype
ENSMUSG00000033006 (Sox10)
SRY (sex determining region Y)-box 10 		ENSMUST00000040019 (Sox10-201) 79154913-79164490 protein_coding
ENSMUSG00000033020 (Polr2f)
polymerase (RNA) II (DNA directed) polypeptide F 		ENSMUST00000040077 (Polr2f-201) 79141351-79151774 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007CX_0001ENSG00000222044ENST00000410099ENSG00000279010ENST00000623111CIL_0007CX_0002ENSMUSG00000033006ENSMUST00000040019ENSMUSG00000033020ENSMUST00000040077
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007CX_0001ENSG00000222044ENST00000410099ENSG00000279010ENST00000623111CIL_0007CX_0002ENSMUSG00000033006ENSMUST00000040019ENSMUSG00000033020ENSMUST00000040077
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000222044 ENST00000410099 0.037±0.00 0.372±0.00 N/A 0.376±0.00 0.191±0.00 0.132±0.00 0.221±0.00 0.142±0.00 0.018±0.00 0.137±0.00 0.051±0.00 0.091±0.04 N/A 0.204±0.19
ENSG00000279010 ENST00000623111 0.471±0.00 0.657±0.00 0.058±0.00 1.094±0.00 0.339±0.23 0.270±0.13 0.119±0.06 0.363±0.00 0.201±0.09 0.139±0.05 0.126±0.00 0.206±0.13 N/A 0.549±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000033006 ENSMUST00000040019 0.632±0.11 1.519±0.33 5.085±0.69 5.000±3.72 18.173±3.73 3.255±0.51 1.100±0.34 0.356±0.09 0.164±0.24 0.614±0.09 0.597±0.27 0.295±0.20 0.031±0.00 0.481±0.18
ENSMUSG00000033020 ENSMUST00000040077 40.620±7.76 49.053±3.18 122.104±10.26 80.959±29.98 26.946±10.48 45.586±9.37 39.423±5.97 52.461±10.84 54.404±32.74 31.293±2.07 37.052±2.80 53.214±36.20 150.755±85.09 31.617±0.41

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