C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0007D8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000155876-ENSG00000147874 CGP 9606 9:19049395-19103119
GeneTranscriptPositionBiotype
ENSG00000147874 (HAUS6)
HAUS augmin-like complex, subunit 6
ENST00000380496 (HAUS6-002) 19056618-19093213 protein_coding
ENST00000380502 (HAUS6-001) 19053143-19103119 protein_coding
ENST00000415524 (HAUS6-003) 19058764-19065084 protein_coding
ENSG00000155876 (RRAGA)
Ras-related GTP binding A
ENST00000380527 (RRAGA-001) 19049395-19050983 protein_coding
ENSG00000201118 (Y_RNA)
Y RNA
ENST00000364248 (Y_RNA.1-422) 19089593-19089688 misc_RNA
ENSG00000251733 (SCARNA8)
small Cajal body-specific RNA 8
ENST00000515924 (SCARNA8-201) 19063656-19063786 snoRNA
CIL_0007D8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000070934-ENSMUSG00000038047 CGP 10090 4:86575668-86612055
GeneTranscriptPositionBiotype
ENSMUSG00000038047 (Haus6)
HAUS augmin-like complex, subunit 6
ENSMUST00000070607 (Haus6-001) 86578855-86612055 protein_coding
ENSMUST00000123432 (Haus6-004) 86602873-86612019 processed_transcript
ENSMUST00000125481 (Haus6-003) 86605637-86612049 protein_coding
ENSMUST00000128381 (Haus6-002) 86585027-86612055 processed_transcript
ENSMUSG00000070934 (Rraga)
Ras-related GTP binding A
ENSMUST00000091064 (Rraga-001) 86575668-86577285 protein_coding
ENSMUSG00000088958 (Scarna8)
small Cajal body-specific RNA 8
ENSMUST00000158333 (Scarna8-201) 86586453-86586583 snoRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007D8_0001ENSG00000147874ENST00000380496ENST00000380502ENST00000415524ENSG00000155876ENST00000380527ENSG00000201118ENST00000364248ENSG00000251733ENST00000515924CIL_0007D8_0002ENSMUSG00000038047ENSMUST00000070607ENSMUST00000123432ENSMUST00000125481ENSMUST00000128381ENSMUSG00000070934ENSMUST00000091064ENSMUSG00000088958ENSMUST00000158333
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007D8_0001ENSG00000147874ENST00000380496ENST00000380502ENSG00000155876ENST00000380527ENSG00000201118ENST00000364248ENSG00000251733ENST00000515924CIL_0007D8_0002ENSMUSG00000038047ENSMUST00000070607ENSMUST00000123432ENSMUST00000125481ENSMUST00000128381ENSMUSG00000070934ENSMUST00000091064ENSMUSG00000088958ENSMUST00000158333
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000147874 ENST00000380496 N/A 0.443±0.00 N/A N/A N/A 0.479±0.00 0.180±0.00 N/A N/A 0.474±0.00 N/A 0.892±0.00 0.180±0.00 N/A
ENST00000380502 1.145±0.00 0.718±0.00 0.483±0.00 1.843±0.31 1.055±0.06 0.518±0.00 0.709±0.00 0.830±0.13 0.566±0.34 0.568±0.00 0.309±0.18 2.061±1.45 0.522±0.08 5.216±3.35
ENST00000415524 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000155876 ENST00000380527 16.469±0.00 43.163±0.00 3.265±0.00 41.042±25.87 10.038±4.76 12.496±8.41 20.346±17.21 17.958±11.50 20.102±12.75 13.860±7.76 46.418±0.00 37.207±27.94 60.899±13.55 39.930±14.24
ENSG00000201118 ENST00000364248 1.065±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000251733 ENST00000515924 N/A N/A N/A 51.427±0.00 14.434±13.83 66.816±0.00 29.958±0.00 62.987±0.00 202.171±0.00 69.648±0.00 49.103±0.00 188.315±0.00 N/A 0.542±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038047 ENSMUST00000070607 0.584±0.49 0.707±0.13 1.200±0.05 1.900±0.93 0.673±0.15 0.587±0.14 0.320±0.13 0.429±0.14 1.433±1.30 0.798±0.27 0.795±0.25 0.888±0.27 2.020±1.35 1.520±0.58
ENSMUST00000123432 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.786±0.17 N/A N/A
ENSMUST00000125481 3.878±0.00 3.017±1.06 N/A N/A 3.747±1.05 1.849±0.89 N/A 1.060±0.14 0.806±0.24 3.187±0.21 N/A 3.106±1.78 N/A 4.413±0.62
ENSMUST00000128381 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.373±0.00 N/A 1.567±0.00 0.785±0.00 N/A
ENSMUSG00000070934 ENSMUST00000091064 34.795±2.42 76.449±7.84 49.616±8.03 50.623±15.87 28.295±6.56 24.040±1.31 14.709±1.77 21.036±1.33 25.141±11.51 31.248±3.41 21.140±1.33 47.236±17.58 22.407±9.99 10.416±4.19
ENSMUSG00000088958 ENSMUST00000158333 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.204±0.00 N/A

Loading