C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Ras-related GTP binding A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000380527 RRAGA-001 ENSG00000155876 9606 + 9:19049395-19050983 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000380527
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000380527 16.469±0.00 43.163±0.00 3.265±0.00 41.042±25.87 10.038±4.76 12.496±8.41 20.346±17.21 17.958±11.50 20.102±12.75 13.860±7.76 46.418±0.00 37.207±27.94 60.899±13.55 39.930±14.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007D9 CIL_0007D9_0001 CGP 9:18927658-19050983
CIL_0007D8 CIL_0007D8_0001 CGP 9:19049395-19103119

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005525 IDA:IEA GTP binding
GO:0005634 IDA:IEA nucleus
GO:0005737 IDA:IEA cytoplasm
GO:0005764 IDA lysosome
GO:0005765 IDA lysosomal membrane
GO:0005794 IDA Golgi apparatus
GO:0006915 IEA apoptotic process
GO:0007264 IEA small GTPase mediated signal transduction
GO:0008219 IDA cell death
GO:0019048 IDA modulation by virus of host morphology or physiology
GO:0032008 NAS positive regulation of TOR signaling
GO:0034613 IMP cellular protein localization
GO:0042803 IDA protein homodimerization activity
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0045919 IDA positive regulation of cytolysis
GO:0046982 IPI protein heterodimerization activity
GO:0051219 IDA phosphoprotein binding
GO:0071230 IMP cellular response to amino acid stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000091064 Rraga-001 protein_coding Mus_musculus 0 1548

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