C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Ras-related GTP binding A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000091064 Rraga-001 ENSMUSG00000070934 10090 + 4:86575668-86577285 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000091064
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000091064 34.795±2.42 76.449±7.84 49.616±8.03 50.623±15.87 28.295±6.56 24.040±1.31 14.709±1.77 21.036±1.33 25.141±11.51 31.248±3.41 21.140±1.33 47.236±17.58 22.407±9.99 10.416±4.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007D9 CIL_0007D9_0002 CGP 4:86444641-86577285
CIL_0007D8 CIL_0007D8_0002 CGP 4:86575668-86612055

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005525 ISS GTP binding
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0005764 ISS lysosome
GO:0005765 IEA lysosomal membrane
GO:0005794 IEA Golgi apparatus
GO:0006915 IEA apoptotic process
GO:0008219 ISS cell death
GO:0019048 ISS modulation by virus of host morphology or physiology
GO:0034613 ISS cellular protein localization
GO:0042803 ISS protein homodimerization activity
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0045919 ISS positive regulation of cytolysis
GO:0046982 ISS protein heterodimerization activity
GO:0051219 ISS phosphoprotein binding
GO:0071230 ISS cellular response to amino acid stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262850 RRAGB-001 protein_coding Homo_sapiens 4e-29 134
ENST00000374941 RRAGB-002 protein_coding Homo_sapiens 0 953
ENST00000380527 RRAGA-001 protein_coding Homo_sapiens 0 1548
ENST00000414239 RRAGB-005 protein_coding Homo_sapiens 0 610

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