C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007GG_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000154781-ENSG00000131379 CGP 9606 3:14651746-14773034
GeneTranscriptPositionBiotype
ENSG00000131379 (C3orf20)
chromosome 3 open reading frame 20 		ENST00000253697 (C3orf20-001) 14675099-14773034 protein_coding
ENST00000412910 (C3orf20-004) 14675179-14773034 protein_coding
ENST00000435614 (C3orf20-003) 14675141-14773005 protein_coding
ENST00000495387 (C3orf20-005) 14704355-14722239 processed_transcript
ENSG00000154781 (CCDC174)
coiled-coil domain containing 174 		ENST00000303688 (CCDC174-004) 14651764-14672659 protein_coding
ENST00000383794 (CCDC174-001) 14651764-14672659 protein_coding
ENST00000463438 (CCDC174-005) 14651764-14661900 retained_intron
ENST00000465759 (CCDC174-003) 14651773-14667298 retained_intron
ENST00000476763 (CCDC174-006) 14668002-14671027 processed_transcript
ENST00000611584 (CCDC174-201) 14651746-14672653 protein_coding
ENSG00000230172 (AC090957.2)
 ENST00000422657 (AC090957.2-001) 14764952-14767440 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_0007GG_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000034083-ENSMUSG00000034063 CGP 10090 6:91878053-91950640
GeneTranscriptPositionBiotype
ENSMUSG00000034063 (4930590J08Rik)
RIKEN cDNA 4930590J08 gene 		ENSMUST00000059318 (4930590J08Rik-201) 91914759-91950640 protein_coding
ENSMUSG00000034083 (Ccdc174)
coiled-coil domain containing 174 		ENSMUST00000037783 (Ccdc174-001) 91878053-91899843 protein_coding
ENSMUST00000136090 (Ccdc174-002) 91878053-91899843 retained_intron
ENSMUST00000138868 (Ccdc174-003) 91878075-91884987 retained_intron
ENSMUST00000139240 (Ccdc174-005) 91878075-91888317 processed_transcript
ENSMUST00000147188 (Ccdc174-006) 91892347-91895293 retained_intron
ENSMUST00000149546 (Ccdc174-004) 91878072-91880511 processed_transcript
ENSMUST00000151378 (Ccdc174-007) 91892804-91895339 retained_intron

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007GG_0001ENSG00000131379ENST00000253697ENST00000412910ENST00000435614ENST00000495387ENSG00000154781ENST00000303688ENST00000383794ENST00000463438ENST00000465759ENST00000476763ENST00000611584ENSG00000230172ENST00000422657CIL_0007GG_0002ENSMUSG00000034063ENSMUST00000059318ENSMUSG00000034083ENSMUST00000037783ENSMUST00000136090ENSMUST00000138868ENSMUST00000139240ENSMUST00000147188ENSMUST00000149546ENSMUST00000151378
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007GG_0001ENSG00000131379ENST00000253697ENST00000412910ENST00000435614ENST00000495387ENSG00000154781ENST00000303688ENST00000383794ENST00000463438ENST00000465759ENST00000476763ENSG00000230172ENST00000422657CIL_0007GG_0002ENSMUSG00000034063ENSMUST00000059318ENSMUSG00000034083ENSMUST00000037783ENSMUST00000136090ENSMUST00000138868
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000131379 ENST00000253697 0.005±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.025±0.00 N/A 0.013±0.00 N/A 0.549±0.09
ENST00000412910 N/A N/A 0.009±0.00 N/A N/A N/A N/A 0.087±0.06 N/A N/A N/A N/A 0.073±0.03 2.287±0.63
ENST00000435614 N/A N/A 0.010±0.00 0.104±0.00 N/A N/A 0.023±0.00 0.014±0.00 N/A N/A N/A N/A N/A 0.857±0.00
ENST00000495387 N/A N/A N/A N/A 0.080±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000154781 ENST00000303688 N/A 1.654±0.00 N/A 1.415±0.00 N/A N/A 0.329±0.00 N/A N/A 1.258±0.00 1.017±0.00 0.411±0.00 N/A N/A
ENST00000383794 2.294±0.00 3.743±0.00 1.192±0.00 1.372±0.74 2.114±1.06 2.347±1.67 1.459±1.32 2.871±2.23 2.278±0.47 1.113±0.03 2.933±0.00 4.553±2.19 4.157±0.39 9.223±2.83
ENST00000463438 N/A N/A N/A 0.860±0.00 2.180±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465759 0.949±0.00 N/A N/A N/A 2.455±0.00 N/A N/A N/A 0.657±0.00 N/A N/A 0.436±0.00 N/A N/A
ENST00000476763 3.701±0.00 N/A N/A N/A 3.419±0.00 5.657±0.00 N/A N/A 3.027±0.00 3.948±0.00 4.947±0.00 3.294±0.00 N/A 10.384±0.19
ENST00000611584 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000230172 ENST00000422657 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.051±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000034063 ENSMUST00000059318 0.036±0.01 0.058±0.04 0.013±0.00 0.058±0.03 0.037±0.01 0.034±0.00 0.028±0.01 0.021±0.00 0.011±0.00 0.025±0.01 0.025±0.01 0.059±0.04 0.157±0.10 23.126±12.47
ENSMUSG00000034083 ENSMUST00000037783 1.113±0.22 3.432±2.95 4.915±0.37 11.192±6.83 2.543±1.22 0.698±0.34 0.526±0.18 1.116±0.64 2.925±2.25 0.969±0.52 3.550±0.64 8.203±9.88 12.262±7.79 16.831±21.44
ENSMUST00000136090 0.288±0.11 0.614±0.20 0.473±0.01 N/A 0.354±0.15 0.262±0.09 0.113±0.03 0.143±0.02 0.204±0.06 0.395±0.05 N/A 0.493±0.23 N/A N/A
ENSMUST00000138868 0.339±0.04 0.505±0.02 N/A N/A 0.389±0.05 0.266±0.04 0.120±0.03 0.196±0.01 0.455±0.20 0.379±0.12 N/A 0.324±0.10 0.513±0.04 N/A
ENSMUST00000139240 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147188 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149546 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151378 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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