C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 4930590J08 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000059318 4930590J08Rik-201 ENSMUSG00000034063 10090 + 6:91914759-91950640 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000059318
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000059318 0.036±0.01 0.058±0.04 0.013±0.00 0.058±0.03 0.037±0.01 0.034±0.00 0.028±0.01 0.021±0.00 0.011±0.00 0.025±0.01 0.025±0.01 0.059±0.04 0.157±0.10 23.126±12.47

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007GG CIL_0007GG_0002 CGP 6:91878053-91950640
CIL_0007GJ CIL_0007GJ_0002 CGP 6:91914759-92076004

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000253697 C3orf20-001 protein_coding Homo_sapiens 0 1267
ENST00000412910 C3orf20-004 protein_coding Homo_sapiens 0 1223
ENST00000435614 C3orf20-003 protein_coding Homo_sapiens 0 1223

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