C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007H1_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000059298-ENSDARG00000040152 CGP 7955 11:4051512-4086049
GeneTranscriptPositionBiotype
ENSDARG00000040152 (nek4)
NIMA (never in mitosis gene a)-related kinase 4 		ENSDART00000058728 (nek4-001) 4056856-4086049 protein_coding
ENSDARG00000059298 (spcs1)
signal peptidase complex subunit 1 homolog (S. cerevisiae) 		ENSDART00000082379 (spcs1-001) 4051512-4055612 protein_coding

Danio rerio Ensembl (Zv9)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0007H1_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000114902-ENSG00000114904 CGP 9606 3:52704955-52770949
GeneTranscriptPositionBiotype
ENSG00000114904 (NEK4)
NIMA-related kinase 4 		ENST00000233027 (NEK4-001) 52708449-52770949 protein_coding
ENST00000383721 (NEK4-002) 52737498-52770939 protein_coding
ENST00000461689 (NEK4-003) 52737586-52770856 protein_coding
ENST00000487068 (NEK4-005) 52746150-52752070 nonsense_mediated_decay
ENST00000493199 (NEK4-006) 52743228-52746114 retained_intron
ENST00000496822 (NEK4-004) 52766316-52770946 nonsense_mediated_decay
ENST00000535191 (NEK4-201) 52711777-52770939 protein_coding
ENSG00000270941 (RP5-966M1.5)
 ENST00000603259 (RP5-966M1.5-001) 52734735-52735013 processed_pseudogene
ENSG00000271137 (RP5-966M1.4)
 ENST00000603353 (RP5-966M1.4-001) 52753526-52754690 processed_pseudogene
ENSG00000275956 (RP5-966M1.7)
 ENST00000613728 (RP5-966M1.7-001) 52732547-52733867 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007H1_0001ENSDARG00000040152ENSDART00000058728ENSDARG00000059298ENSDART00000082379CIL_0007H1_0002ENSG00000114904ENST00000233027ENST00000383721ENST00000461689ENST00000487068ENST00000493199ENST00000496822ENST00000535191ENSG00000270941ENST00000603259ENSG00000271137ENST00000603353ENSG00000275956ENST00000613728
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007H1_0001ENSDARG00000040152ENSDART00000058728ENSDARG00000059298ENSDART00000082379CIL_0007H1_0002ENSG00000114904ENST00000233027ENST00000383721ENST00000535191ENSG00000270941ENST00000603259ENSG00000271137ENST00000603353ENSG00000275956ENST00000613728
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000040152 ENSDART00000058728 N/A N/A N/A 1.474±1.38 N/A N/A 1.230±0.45 2.838±1.21 0.120±0.00 N/A 0.779±0.00 N/A N/A N/A
ENSDARG00000059298 ENSDART00000082379 N/A N/A N/A 19.895±14.89 N/A N/A 19.180±17.65 14.855±18.65 2.320±0.00 N/A 26.491±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000114904 ENST00000233027 3.698±0.00 4.685±0.00 1.908±0.00 4.322±0.63 3.606±0.37 2.882±0.37 1.950±0.65 5.508±1.03 2.498±0.00 2.550±0.66 0.497±0.00 4.600±2.19 N/A 22.241±0.00
ENST00000383721 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.073±0.00 N/A N/A N/A N/A
ENST00000461689 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487068 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493199 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496822 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535191 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 44.987±0.00
ENSG00000270941 ENST00000603259 N/A 0.099±0.00 N/A N/A 0.314±0.00 N/A N/A N/A 0.174±0.00 N/A N/A N/A N/A 0.043±0.00
ENSG00000271137 ENST00000603353 0.052±0.00 0.105±0.00 0.699±0.00 0.053±0.00 0.187±0.00 0.108±0.00 N/A 0.202±0.00 N/A N/A N/A 0.060±0.00 N/A 0.033±0.00
ENSG00000275956 ENST00000613728 0.040±0.00 0.311±0.00 0.234±0.00 0.067±0.02 0.157±0.11 0.037±0.00 0.103±0.00 0.115±0.09 0.042±0.00 0.118±0.04 0.071±0.00 0.150±0.10 N/A 0.119±0.03

Loading