C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007H1_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000059298-ENSDARG00000040152 CGP 7955 11:4051512-4086049
GeneTranscriptPositionBiotype
ENSDARG00000040152 (nek4)
NIMA (never in mitosis gene a)-related kinase 4 		ENSDART00000058728 (nek4-001) 4056856-4086049 protein_coding
ENSDARG00000059298 (spcs1)
signal peptidase complex subunit 1 homolog (S. cerevisiae) 		ENSDART00000082379 (spcs1-001) 4051512-4055612 protein_coding
CIL_0007H1_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000114902-ENSG00000114904 CGP 9606 3:52704955-52770949
GeneTranscriptPositionBiotype
ENSG00000114904 (NEK4)
NIMA-related kinase 4 		ENST00000233027 (NEK4-001) 52708449-52770949 protein_coding
ENST00000383721 (NEK4-002) 52737498-52770939 protein_coding
ENST00000461689 (NEK4-003) 52737586-52770856 protein_coding
ENST00000487068 (NEK4-005) 52746150-52752070 nonsense_mediated_decay
ENST00000493199 (NEK4-006) 52743228-52746114 retained_intron
ENST00000496822 (NEK4-004) 52766316-52770946 nonsense_mediated_decay
ENST00000535191 (NEK4-201) 52711777-52770939 protein_coding
ENSG00000270941 (RP5-966M1.5)
 ENST00000603259 (RP5-966M1.5-001) 52734735-52735013 processed_pseudogene
ENSG00000271137 (RP5-966M1.4)
 ENST00000603353 (RP5-966M1.4-001) 52753526-52754690 processed_pseudogene
ENSG00000275956 (RP5-966M1.7)
 ENST00000613728 (RP5-966M1.7-001) 52732547-52733867 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007H1_0001ENSDARG00000040152ENSDART00000058728ENSDARG00000059298ENSDART00000082379CIL_0007H1_0002ENSG00000114904ENST00000233027ENST00000383721ENST00000461689ENST00000487068ENST00000493199ENST00000496822ENST00000535191ENSG00000270941ENST00000603259ENSG00000271137ENST00000603353ENSG00000275956ENST00000613728
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007H1_0001ENSDARG00000040152ENSDART00000058728ENSDARG00000059298ENSDART00000082379CIL_0007H1_0002ENSG00000114904ENST00000233027ENST00000383721ENST00000535191ENSG00000270941ENST00000603259ENSG00000271137ENST00000603353ENSG00000275956ENST00000613728
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000040152 ENSDART00000058728 N/A N/A N/A 1.474±1.38 N/A N/A 1.230±0.45 2.838±1.21 0.120±0.00 N/A 0.779±0.00 N/A N/A N/A
ENSDARG00000059298 ENSDART00000082379 N/A N/A N/A 19.895±14.89 N/A N/A 19.180±17.65 14.855±18.65 2.320±0.00 N/A 26.491±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000114904 ENST00000233027 3.698±0.00 4.685±0.00 1.908±0.00 4.322±0.63 3.606±0.37 2.882±0.37 1.950±0.65 5.508±1.03 2.498±0.00 2.550±0.66 0.497±0.00 4.600±2.19 N/A 22.241±0.00
ENST00000383721 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.073±0.00 N/A N/A N/A N/A
ENST00000461689 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487068 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493199 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496822 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535191 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 44.987±0.00
ENSG00000270941 ENST00000603259 N/A 0.099±0.00 N/A N/A 0.314±0.00 N/A N/A N/A 0.174±0.00 N/A N/A N/A N/A 0.043±0.00
ENSG00000271137 ENST00000603353 0.052±0.00 0.105±0.00 0.699±0.00 0.053±0.00 0.187±0.00 0.108±0.00 N/A 0.202±0.00 N/A N/A N/A 0.060±0.00 N/A 0.033±0.00
ENSG00000275956 ENST00000613728 0.040±0.00 0.311±0.00 0.234±0.00 0.067±0.02 0.157±0.11 0.037±0.00 0.103±0.00 0.115±0.09 0.042±0.00 0.118±0.04 0.071±0.00 0.150±0.10 N/A 0.119±0.03

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