C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000613728 RP5-966M1.7-001 ENSG00000275956 9606 + 3:52732547-52733867 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000613728
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000613728 0.040±0.00 0.311±0.00 0.234±0.00 0.067±0.02 0.157±0.11 0.037±0.00 0.103±0.00 0.115±0.09 0.042±0.00 0.118±0.04 0.071±0.00 0.150±0.10 0.119±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007H1 CIL_0007H1_0002 CGP 3:52704955-52770949

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000188801 RP23-408P8.1-001 protein_coding Mus_musculus 0.00000004 64
ENSMUST00000182643 Gm26919-001 protein_coding Mus_musculus 0.0000005 60
ENSMUST00000183072 Gm27047-001 unprocessed_pseudogene Mus_musculus 0.000002 58
ENSMUST00000109732 Zfp429-001 protein_coding Mus_musculus 0.000002 58
ENSMUST00000181071 Zfp429-002 protein_coding Mus_musculus 0.000002 58
ENSMUST00000021997 Rsl1-001 protein_coding Mus_musculus 0.00002 55

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