C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007HB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000075435-ENSDARG00000068141 CGP 7955 9:18488153-18559516
GeneTranscriptPositionBiotype
ENSDARG00000068141 (tnfsf11)
tumor necrosis factor (ligand) superfamily, member 11 		ENSDART00000098355 (tnfsf11-001) 18539506-18559516 protein_coding
ENSDARG00000075435 (akap11)
A kinase (PRKA) anchor protein 11 		ENSDART00000108491 (akap11-201) 18495580-18522848 protein_coding
ENSDART00000149736 (akap11-001) 18488153-18522850 protein_coding
ENSDART00000149942 (akap11-002) 18504684-18514694 processed_transcript

Danio rerio Ensembl (Zv9)

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CIL_0007HB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000023516-ENSG00000120659 CGP 9606 13:42272153-42608013
GeneTranscriptPositionBiotype
ENSG00000023516 (AKAP11)
A kinase (PRKA) anchor protein 11 		ENST00000025301 (AKAP11-001) 42272153-42323267 protein_coding
ENSG00000120659 (TNFSF11)
tumor necrosis factor (ligand) superfamily, member 11 		ENST00000239849 (TNFSF11-201) 42574304-42606918 protein_coding
ENST00000358545 (TNFSF11-002) 42562736-42607174 protein_coding
ENST00000398795 (TNFSF11-001) 42574153-42608012 protein_coding
ENST00000405262 (TNFSF11-202) 42566617-42608013 protein_coding
ENST00000544862 (TNFSF11-203) 42574224-42606918 protein_coding

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007HB_0001ENSDARG00000068141ENSDART00000098355ENSDARG00000075435ENSDART00000108491ENSDART00000149736ENSDART00000149942CIL_0007HB_0002ENSG00000023516ENST00000025301ENSG00000120659ENST00000239849ENST00000358545ENST00000398795ENST00000405262ENST00000544862
Region; Gene Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007HB_0001ENSDARG00000068141ENSDART00000098355ENSDARG00000075435ENSDART00000108491ENSDART00000149736CIL_0007HB_0002ENSG00000023516ENST00000025301ENSG00000120659ENST00000239849ENST00000358545ENST00000398795ENST00000544862
Gene Transcript Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000068141 ENSDART00000098355 N/A N/A 0.214±0.04 N/A N/A 0.178±0.18 N/A N/A N/A 0.164±0.00 N/A N/A N/A
ENSDARG00000075435 ENSDART00000108491 N/A N/A 17.451±7.56 N/A N/A 3.987±2.06 2.468±0.97 0.149±0.00 N/A 1.871±0.00 N/A N/A N/A
ENSDART00000149736 N/A N/A 15.991±4.04 N/A N/A 1.078±0.54 N/A N/A N/A 0.387±0.00 N/A N/A N/A
ENSDART00000149942 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000023516 ENST00000025301 6.855±0.00 2.884±0.00 17.745±10.29 3.655±2.02 4.876±1.52 5.083±0.00 2.456±0.00 1.714±0.00 2.107±0.42 1.834±0.98 2.648±1.64 0.604±0.14 7.240±3.34
ENSG00000120659 ENST00000239849 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.743±0.60 N/A N/A
ENST00000358545 0.026±0.00 N/A N/A 0.012±0.00 N/A 0.015±0.00 N/A N/A N/A N/A N/A N/A 0.938±0.60
ENST00000398795 0.029±0.00 4.242±0.00 N/A 0.464±0.44 0.126±0.00 N/A 0.224±0.21 0.197±0.00 0.043±0.00 N/A 0.164±0.15 N/A N/A
ENST00000405262 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544862 N/A N/A N/A 0.028±0.00 0.225±0.00 0.031±0.00 N/A 0.163±0.00 N/A N/A N/A 0.048±0.00 N/A

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