C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007SV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs2079 VISTA 9606 7:42192569-42794765
GeneTranscriptPositionBiotype
ENSG00000106571 (GLI3)
GLI family zinc finger 3 		ENST00000395925 (GLI3-001) 41960950-42237013 protein_coding
ENST00000428534 (GLI3-003) 42222800-42237870 retained_intron
ENST00000437480 (GLI3-004) 42172491-42237059 protein_coding
ENST00000448703 (GLI3-005) 42048630-42227721 protein_coding
ENST00000464291 (GLI3-006) 41972440-41977922 retained_intron
ENST00000479210 (GLI3-002) 41964082-42152453 processed_transcript
ENSG00000238284 (LINC01448)
long intergenic non-protein coding RNA 1448 		ENST00000455947 (LINC01448-001) 42661726-42706447 lincRNA
ENSG00000276614 (AC005158.1)
 ENST00000615070 (AC005158.1-201) 42218409-42218514 miRNA
CIL_0007SV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs2079 VISTA 10090 13:14854945-15458128
GeneTranscriptPositionBiotype
ENSMUSG00000097806 (Gm6556)
predicted gene 6556 		ENSMUST00000181118 (Gm6556-001) 15440302-15462669 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007SV_0001ENSG00000106571ENST00000395925ENST00000428534ENST00000437480ENST00000448703ENST00000464291ENST00000479210ENSG00000238284ENST00000455947ENSG00000276614ENST00000615070CIL_0007SV_0002ENSMUSG00000097806ENSMUST00000181118
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007SV_0001ENSG00000106571ENST00000395925ENST00000448703ENST00000479210ENSG00000238284ENST00000455947ENSG00000276614ENST00000615070CIL_0007SV_0002ENSMUSG00000097806ENSMUST00000181118
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000106571 ENST00000395925 2.729±0.00 1.039±0.00 0.364±0.00 0.497±0.21 1.615±0.00 1.009±0.89 0.350±0.28 0.361±0.27 0.390±0.00 0.543±0.44 0.416±0.00 1.460±0.02 3.047±0.56 0.892±0.46
ENST00000428534 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000437480 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000448703 N/A N/A N/A N/A N/A 1.391±0.00 0.192±0.00 0.599±0.00 N/A N/A N/A N/A N/A N/A
ENST00000464291 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479210 N/A N/A N/A N/A N/A N/A 0.078±0.00 0.028±0.00 N/A 0.813±0.00 0.276±0.00 N/A N/A 0.862±0.00
ENSG00000238284 ENST00000455947 N/A N/A 0.062±0.00 0.008±0.00 0.008±0.00 N/A 0.015±0.00 0.222±0.00 N/A 0.209±0.00 N/A 0.047±0.00 0.105±0.07 0.158±0.10
ENSG00000276614 ENST00000615070 N/A N/A N/A 1.043±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000097806 ENSMUST00000181118 0.162±0.00 N/A N/A N/A N/A N/A N/A 0.178±0.00 N/A N/A N/A N/A 0.266±0.00 0.237±0.09

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