C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GLI family zinc finger 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000479210 GLI3-002 ENSG00000106571 9606 - 7:41964082-42152453 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyLungMuscleTestisENST00000479210
Transcript ID Heart Kidney Lung Muscle Testis
ENST00000479210 0.078±0.00 0.028±0.00 0.813±0.00 0.276±0.00 0.862±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007Z6 CIL_0007Z6_0001 VISTA 7:41404793-42006682
CIL_0008OL CIL_0008OL_0001 VISTA 7:41719979-42321204
CIL_0007V6 CIL_0007V6_0001 VISTA 7:41846003-42447909
CIL_0008NK CIL_0008NK_0001 VISTA 7:41852129-42454039
CIL_0009D0 CIL_0009D0_0001 VISTA 7:41913232-42514961

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000110510 Gli3-001 protein_coding Mus_musculus 0 4826
ENSMUST00000130065 Gli3-003 protein_coding Mus_musculus 0 2089
ENSMUST00000130535 Gli3-002 retained_intron Mus_musculus 0 1720
ENSMUST00000141194 Gli3-004 processed_transcript Mus_musculus 0 414

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