C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00080T_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs621 VISTA 9606 13:111084951-111685694
GeneTranscriptPositionBiotype
ENSG00000102606 (ARHGEF7)
Rho guanine nucleotide exchange factor (GEF) 7 		ENST00000218789 (ARHGEF7-001) 111153714-111305731 protein_coding
ENST00000317133 (ARHGEF7-008) 111114619-111293436 protein_coding
ENST00000375723 (ARHGEF7-005) 111205289-111295192 protein_coding
ENST00000375736 (ARHGEF7-007) 111153738-111305731 protein_coding
ENST00000375739 (ARHGEF7-201) 111115277-111295195 protein_coding
ENST00000375741 (ARHGEF7-202) 111115277-111295195 protein_coding
ENST00000422836 (ARHGEF7-017) 111115419-111116575 processed_transcript
ENST00000426073 (ARHGEF7-004) 111186854-111305737 protein_coding
ENST00000426768 (ARHGEF7-009) 111203060-111217885 protein_coding
ENST00000449979 (ARHGEF7-003) 111115428-111217880 protein_coding
ENST00000466143 (ARHGEF7-013) 111153689-111283226 protein_coding
ENST00000467053 (ARHGEF7-016) 111184938-111217865 protein_coding
ENST00000469877 (ARHGEF7-012) 111153689-111283298 nonsense_mediated_decay
ENST00000478679 (ARHGEF7-011) 111241220-111292458 protein_coding
ENST00000483189 (ARHGEF7-010) 111241145-111276031 processed_transcript
ENST00000483540 (ARHGEF7-014) 111114559-111153962 processed_transcript
ENST00000491688 (ARHGEF7-006) 111282828-111286236 processed_transcript
ENST00000491775 (ARHGEF7-015) 111153647-111217800 protein_coding
ENST00000544132 (ARHGEF7-018) 111275651-111281109 protein_coding
ENSG00000153495 (TEX29)
testis expressed 29 		ENST00000283547 (TEX29-002) 111320668-111344247 protein_coding
ENST00000497241 (TEX29-001) 111316184-111344249 nonsense_mediated_decay
ENSG00000204398 (RP11-65D24.2)
 ENST00000375713 (RP11-65D24.2-001) 111588291-111672608 lincRNA
ENST00000607406 (RP11-65D24.2-002) 111588201-111589941 lincRNA
ENSG00000215881 (RP11-65D24.1)
 ENST00000401043 (RP11-65D24.1-001) 111596009-111642079 lincRNA
ENSG00000225870 (LINC00368)
long intergenic non-protein coding RNA 368 		ENST00000422994 (LINC00368-001) 111095838-111103097 lincRNA
ENSG00000227352 (ARHGEF7-AS1)
ARHGEF7 antisense RNA 1 		ENST00000435037 (ARHGEF7-AS1-001) 111144305-111144733 antisense
ENSG00000233644 (ARHGEF7-IT1)
ARHGEF7 intronic transcript 1 (non-protein coding) 		ENST00000423329 (ARHGEF7-IT1-001) 111122652-111144264 sense_intronic
ENSG00000274614 (RP11-17E4.1)
 ENST00000619088 (RP11-17E4.1-001) 111182111-111182692 unprocessed_pseudogene
CIL_00080T_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs621 VISTA 10090 8:11596202-12196925
GeneTranscriptPositionBiotype
ENSMUSG00000031508 (Ankrd10)
ankyrin repeat domain 10 		ENSMUST00000033905 (Ankrd10-201) 11611583-11635754 protein_coding
ENSMUST00000169782 (Ankrd10-202) 11614151-11635754 protein_coding
ENSMUSG00000031509 (1700016D06Rik)
RIKEN cDNA 1700016D06 gene 		ENSMUST00000033906 (1700016D06Rik-001) 11654924-11678750 protein_coding
ENSMUST00000190741 (1700016D06Rik-002) 11655479-11701063 protein_coding
ENSMUST00000190787 (1700016D06Rik-003) 11655478-11660735 processed_transcript
ENSMUST00000191350 (1700016D06Rik-004) 11655480-11662604 protein_coding
ENSMUSG00000031510 (1700128E19Rik)
RIKEN cDNA 1700128E19 gene 		ENSMUST00000134409 (1700128E19Rik-001) 11713264-11722620 lincRNA
ENSMUSG00000031512 (Tex29)
testis expressed 29 		ENSMUST00000033909 (Tex29-001) 11840474-11855761 protein_coding
ENSMUST00000132536 (Tex29-002) 11842061-11855757 processed_transcript
ENSMUST00000144007 (Tex29-003) 11840611-11844158 processed_transcript
ENSMUST00000166638 (Tex29-201) 11840919-11855705 protein_coding
ENSMUSG00000086500 (Gm15875)
predicted gene 15875 		ENSMUST00000152264 (Gm15875-001) 11838978-11840400 antisense
ENSMUSG00000093319 (Gm27854)
predicted gene, 27854 		ENSMUST00000175578 (Gm27854-201) 11696615-11696858 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00080T_0001ENSG00000102606ENST00000218789ENST00000317133ENST00000375723ENST00000375736ENST00000375739ENST00000375741ENST00000422836ENST00000426073ENST00000426768ENST00000449979ENST00000466143ENST00000467053ENST00000469877ENST00000478679ENST00000483189ENST00000483540ENST00000491688ENST00000491775ENST00000544132ENSG00000153495ENST00000283547ENST00000497241ENSG00000204398ENST00000375713ENST00000607406ENSG00000215881ENST00000401043ENSG00000225870ENST00000422994ENSG00000227352ENST00000435037ENSG00000233644ENST00000423329ENSG00000274614ENST00000619088CIL_00080T_0002ENSMUSG00000031508ENSMUST00000033905ENSMUST00000169782ENSMUSG00000031509ENSMUST00000033906ENSMUST00000190741ENSMUST00000190787ENSMUST00000191350ENSMUSG00000031510ENSMUST00000134409ENSMUSG00000031512ENSMUST00000033909ENSMUST00000132536ENSMUST00000144007ENSMUST00000166638ENSMUSG00000086500ENSMUST00000152264ENSMUSG00000093319ENSMUST00000175578
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00080T_0001ENSG00000102606ENST00000218789ENST00000375723ENST00000375736ENST00000375741ENST00000426073ENST00000466143ENSG00000153495ENST00000283547ENST00000497241ENSG00000204398ENST00000375713ENST00000607406ENSG00000215881ENST00000401043ENSG00000225870ENST00000422994ENSG00000227352ENST00000435037ENSG00000233644ENST00000423329ENSG00000274614ENST00000619088CIL_00080T_0002ENSMUSG00000031508ENSMUST00000033905ENSMUST00000169782ENSMUSG00000031509ENSMUST00000033906ENSMUST00000191350ENSMUSG00000031510ENSMUST00000134409ENSMUSG00000031512ENSMUST00000033909ENSMUST00000132536ENSMUST00000144007ENSMUST00000166638ENSMUSG00000086500ENSMUST00000152264ENSMUSG00000093319ENSMUST00000175578
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000102606 ENST00000218789 N/A N/A N/A 6.709±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000317133 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000375723 N/A N/A N/A 5.138±2.23 1.352±0.00 0.728±0.00 N/A N/A 1.025±0.00 N/A N/A 1.335±0.00 N/A 3.166±0.00
ENST00000375736 12.472±0.00 4.092±0.00 1.709±0.00 N/A 6.899±4.34 3.681±2.94 2.989±2.55 7.249±0.00 1.320±0.09 3.233±0.86 7.016±0.00 8.250±4.25 8.567±0.00 7.897±2.85
ENST00000375739 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000375741 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.491±0.00
ENST00000422836 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000426073 N/A N/A N/A 3.027±0.00 N/A N/A N/A N/A N/A 1.032±0.00 N/A N/A N/A N/A
ENST00000426768 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000449979 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466143 N/A N/A N/A N/A N/A N/A 1.515±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000467053 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469877 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478679 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483189 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483540 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491688 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491775 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544132 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000153495 ENST00000283547 0.258±0.00 0.112±0.00 N/A 0.856±0.28 N/A 0.215±0.00 0.052±0.00 0.138±0.00 0.131±0.00 N/A N/A 0.310±0.11 0.205±0.01 24.531±4.61
ENST00000497241 N/A N/A N/A N/A 0.201±0.00 N/A N/A 0.155±0.00 N/A 0.389±0.00 N/A N/A N/A N/A
ENSG00000204398 ENST00000375713 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.671±0.40
ENST00000607406 N/A N/A N/A N/A N/A 0.087±0.00 0.029±0.00 0.055±0.00 N/A N/A 0.112±0.00 N/A N/A 0.231±0.08
ENSG00000215881 ENST00000401043 N/A N/A N/A 0.152±0.00 0.192±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.296±0.00
ENSG00000225870 ENST00000422994 0.137±0.00 N/A N/A N/A 0.178±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.094±0.00
ENSG00000227352 ENST00000435037 0.168±0.00 N/A 0.735±0.00 0.045±0.00 0.043±0.00 0.500±0.00 N/A N/A N/A 1.197±0.00 N/A N/A N/A 2.002±0.00
ENSG00000233644 ENST00000423329 0.048±0.00 0.095±0.00 N/A 0.103±0.02 0.216±0.00 0.191±0.13 0.043±0.00 N/A 0.242±0.00 N/A N/A N/A 0.090±0.02 2.025±0.00
ENSG00000274614 ENST00000619088 N/A 0.153±0.00 0.176±0.00 0.043±0.00 0.277±0.24 N/A 0.217±0.00 0.280±0.00 0.176±0.00 0.187±0.00 0.366±0.00 0.045±0.00 N/A 0.074±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031508 ENSMUST00000033905 27.850±18.01 32.753±16.80 22.161±2.70 34.760±25.64 31.017±10.35 48.008±13.28 8.834±2.57 11.875±4.68 10.279±7.84 22.892±5.68 3.930±1.01 76.632±31.16 9.938±4.11 10.391±6.58
ENSMUST00000169782 2.185±0.00 N/A N/A N/A 2.815±0.00 N/A N/A N/A 0.716±0.03 3.413±0.00 N/A N/A N/A 0.894±0.00
ENSMUSG00000031509 ENSMUST00000033906 0.040±0.00 N/A N/A N/A N/A N/A N/A 0.034±0.00 0.049±0.03 N/A N/A 0.309±0.00 0.025±0.01 11.406±4.11
ENSMUST00000190741 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190787 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000191350 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.084±1.12 36.110±0.00
ENSMUSG00000031510 ENSMUST00000134409 0.015±0.00 N/A 0.006±0.00 0.012±0.01 N/A N/A 0.016±0.01 N/A 0.004±0.00 0.014±0.00 N/A 0.047±0.04 0.015±0.01 3.452±1.48
ENSMUSG00000031512 ENSMUST00000033909 N/A N/A N/A N/A 0.158±0.00 N/A 0.078±0.04 0.068±0.03 N/A N/A N/A N/A N/A 70.126±27.92
ENSMUST00000132536 N/A N/A N/A N/A N/A N/A N/A 0.086±0.00 0.016±0.00 N/A N/A 0.209±0.04 0.122±0.01 N/A
ENSMUST00000144007 N/A N/A 0.030±0.00 N/A 0.127±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000166638 N/A N/A 0.035±0.00 N/A N/A N/A N/A N/A N/A 0.095±0.00 N/A 0.326±0.00 N/A 159.118±0.00
ENSMUSG00000086500 ENSMUST00000152264 N/A N/A N/A 0.186±0.00 N/A N/A N/A N/A N/A N/A N/A 0.293±0.00 N/A 6.265±1.02
ENSMUSG00000093319 ENSMUST00000175578 1.013±0.24 N/A N/A 0.039±0.00 0.756±0.00 N/A N/A N/A 0.386±0.13 0.753±0.00 N/A 2.210±0.00 0.540±0.67 1.087±0.64

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