C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00081M_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1790 VISTA 9606 2:120504710-121107153
GeneTranscriptPositionBiotype
ENSG00000229774 (AC018866.1)
 ENST00000421820 (AC018866.1-002) 120709263-120710517 lincRNA
ENST00000444963 (AC018866.1-001) 120686635-120710465 lincRNA
ENSG00000232140 (AC073257.1)
 ENST00000432474 (AC073257.1-001) 120553743-120558109 lincRNA
ENSG00000237614 (AC073257.2)
 ENST00000413991 (AC073257.2-001) 120542909-120544326 lincRNA
ENSG00000271709 (RP11-297J22.1)
 ENST00000603720 (RP11-297J22.1-001) 120866378-120867403 lincRNA
CIL_00081M_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1790 VISTA 9606 2:120507154-121108132
GeneTranscriptPositionBiotype
ENSG00000229774 (AC018866.1)
 ENST00000421820 (AC018866.1-002) 120709263-120710517 lincRNA
ENST00000444963 (AC018866.1-001) 120686635-120710465 lincRNA
ENSG00000232140 (AC073257.1)
 ENST00000432474 (AC073257.1-001) 120553743-120558109 lincRNA
ENSG00000237614 (AC073257.2)
 ENST00000413991 (AC073257.2-001) 120542909-120544326 lincRNA
ENSG00000271709 (RP11-297J22.1)
 ENST00000603720 (RP11-297J22.1-001) 120866378-120867403 lincRNA
CIL_00081M_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1790 VISTA 10090 1:118688411-119294612
GeneTranscriptPositionBiotype
ENSMUSG00000048402 (Gli2)
GLI-Kruppel family member GLI2 		ENSMUST00000062483 (Gli2-001) 118834132-119053619 protein_coding
ENSMUST00000159678 (Gli2-009) 118868042-118982588 processed_transcript
ENSMUST00000159839 (Gli2-007) 118848460-119053339 nonsense_mediated_decay
ENSMUST00000160991 (Gli2-006) 118848460-119053339 nonsense_mediated_decay
ENSMUST00000161056 (Gli2-005) 118848460-119053339 nonsense_mediated_decay
ENSMUST00000161301 (Gli2-002) 118848460-119053339 protein_coding
ENSMUST00000161451 (Gli2-004) 118848462-119053339 protein_coding
ENSMUST00000162552 (Gli2-003) 118848460-119053339 nonsense_mediated_decay
ENSMUST00000162607 (Gli2-008) 118848462-119053339 protein_coding
ENSMUSG00000097408 (Gm26831)
predicted gene, 26831 		ENSMUST00000181458 (Gm26831-001) 119058469-119059848 lincRNA
ENSMUSG00000100040 (RP23-353I19.3)
predicted gene 28467 		ENSMUST00000190981 (RP23-353I19.3-001) 118810136-118810453 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00081M_0001ENSG00000229774ENST00000421820ENST00000444963ENSG00000232140ENST00000432474ENSG00000237614ENST00000413991ENSG00000271709ENST00000603720CIL_00081M_0002ENSG00000229774ENST00000421820ENST00000444963ENSG00000232140ENST00000432474ENSG00000237614ENST00000413991ENSG00000271709ENST00000603720CIL_00081M_0003ENSMUSG00000048402ENSMUST00000062483ENSMUST00000159678ENSMUST00000159839ENSMUST00000160991ENSMUST00000161056ENSMUST00000161301ENSMUST00000161451ENSMUST00000162552ENSMUST00000162607ENSMUSG00000097408ENSMUST00000181458ENSMUSG00000100040ENSMUST00000190981
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00081M_0001ENSG00000229774ENST00000421820ENSG00000232140ENST00000432474ENSG00000237614ENST00000413991ENSG00000271709ENST00000603720CIL_00081M_0002ENSG00000229774ENST00000421820ENSG00000232140ENST00000432474ENSG00000237614ENST00000413991ENSG00000271709ENST00000603720CIL_00081M_0003ENSMUSG00000048402ENSMUST00000062483ENSMUST00000159678ENSMUST00000161451ENSMUST00000162607ENSMUSG00000097408ENSMUST00000181458ENSMUSG00000100040ENSMUST00000190981
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000229774 ENST00000421820 N/A 0.185±0.00 N/A 0.106±0.00 0.049±0.00 0.090±0.00 N/A N/A 0.041±0.00 N/A 0.040±0.00 0.080±0.00 N/A 0.256±0.00
ENST00000444963 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000232140 ENST00000432474 N/A 0.549±0.00 N/A 0.257±0.00 0.033±0.00 0.090±0.00 0.124±0.00 0.428±0.00 0.145±0.00 N/A N/A 0.099±0.00 N/A 0.176±0.10
ENSG00000237614 ENST00000413991 0.401±0.00 0.177±0.00 N/A N/A 0.331±0.00 0.219±0.00 0.053±0.00 0.118±0.00 0.052±0.00 0.082±0.00 0.127±0.00 0.444±0.22 N/A 0.668±0.61
ENSG00000271709 ENST00000603720 N/A N/A N/A N/A N/A 0.117±0.00 N/A 0.063±0.00 0.260±0.23 0.587±0.00 0.101±0.00 0.372±0.44 0.102±0.01 0.057±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000229774 ENST00000421820 N/A 0.185±0.00 N/A 0.106±0.00 0.049±0.00 0.090±0.00 N/A N/A 0.041±0.00 N/A 0.040±0.00 0.080±0.00 N/A 0.256±0.00
ENST00000444963 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000232140 ENST00000432474 N/A 0.549±0.00 N/A 0.257±0.00 0.033±0.00 0.090±0.00 0.124±0.00 0.428±0.00 0.145±0.00 N/A N/A 0.099±0.00 N/A 0.176±0.10
ENSG00000237614 ENST00000413991 0.401±0.00 0.177±0.00 N/A N/A 0.331±0.00 0.219±0.00 0.053±0.00 0.118±0.00 0.052±0.00 0.082±0.00 0.127±0.00 0.444±0.22 N/A 0.668±0.61
ENSG00000271709 ENST00000603720 N/A N/A N/A N/A N/A 0.117±0.00 N/A 0.063±0.00 0.260±0.23 0.587±0.00 0.101±0.00 0.372±0.44 0.102±0.01 0.057±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000048402 ENSMUST00000062483 2.389±1.69 0.277±0.16 1.758±0.32 1.811±1.20 0.883±0.17 0.707±0.33 0.302±0.12 0.030±0.00 0.042±0.05 0.729±0.40 0.092±0.02 2.967±1.55 0.354±0.13 0.254±0.00
ENSMUST00000159678 N/A N/A N/A N/A N/A N/A N/A 0.265±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000159839 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160991 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161056 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161301 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161451 N/A N/A N/A N/A N/A N/A N/A 0.063±0.00 0.054±0.00 N/A N/A N/A N/A 0.313±0.00
ENSMUST00000162552 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162607 N/A N/A N/A N/A N/A N/A N/A 0.162±0.00 N/A N/A N/A N/A N/A N/A
ENSMUSG00000097408 ENSMUST00000181458 0.062±0.03 0.065±0.00 0.095±0.01 0.188±0.13 N/A 0.071±0.00 0.022±0.00 0.029±0.00 0.012±0.00 0.039±0.01 0.030±0.01 0.078±0.07 0.045±0.02 0.027±0.00
ENSMUSG00000100040 ENSMUST00000190981 N/A N/A N/A N/A 0.614±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

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