C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00081V_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs715 VISTA 9606 13:77992624-78594164
GeneTranscriptPositionBiotype
ENSG00000229249 (LINC00446)
long intergenic non-protein coding RNA 446
ENST00000414743 (LINC00446-002) 78012883-78037219 lincRNA
ENST00000438327 (LINC00446-001) 78030936-78053595 lincRNA
ENSG00000229865 (RPL31P54)
ribosomal protein L31 pseudogene 54
ENST00000429803 (RPL31P54-001) 78422823-78423192 processed_pseudogene
ENSG00000271386 (SRGNP1)
serglycin pseudogene 1
ENST00000603392 (SRGNP1-001) 78285838-78286288 processed_pseudogene
CIL_00081V_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs715 VISTA 10090 14:103890395-104491968
GeneTranscriptPositionBiotype
ENSMUSG00000022120 (Rnf219)
ring finger protein 219
ENSMUST00000022716 (Rnf219-201) 104477534-104522666 protein_coding
ENSMUSG00000048349 (Pou4f1)
POU domain, class 4, transcription factor 1
ENSMUST00000053016 (Pou4f1-001) 104461676-104467999 protein_coding
ENSMUST00000139505 (Pou4f1-002) 104463973-104465365 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00081V_0001ENSG00000229249ENST00000414743ENST00000438327ENSG00000229865ENST00000429803ENSG00000271386ENST00000603392CIL_00081V_0002ENSMUSG00000022120ENSMUST00000022716ENSMUSG00000048349ENSMUST00000053016ENSMUST00000139505
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00081V_0001ENSG00000229249ENST00000414743ENST00000438327ENSG00000229865ENST00000429803ENSG00000271386ENST00000603392CIL_00081V_0002ENSMUSG00000022120ENSMUST00000022716ENSMUSG00000048349ENSMUST00000053016ENSMUST00000139505
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000229249 ENST00000414743 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.368±0.00
ENST00000438327 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.227±0.13
ENSG00000229865 ENST00000429803 N/A N/A N/A 0.094±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.162±0.00 N/A
ENSG00000271386 ENST00000603392 N/A N/A N/A 0.933±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022120 ENSMUST00000022716 1.683±0.95 1.279±0.23 2.630±0.15 4.870±0.85 1.256±0.20 1.759±0.24 0.863±0.24 0.959±0.13 1.336±1.16 2.007±0.23 0.627±0.10 4.304±0.86 1.344±0.51 2.865±0.80
ENSMUSG00000048349 ENSMUST00000053016 0.010±0.00 0.096±0.05 0.027±0.01 4.451±3.14 0.067±0.03 0.091±0.02 0.028±0.00 0.026±0.01 0.009±0.00 0.042±0.01 0.166±0.06 0.428±0.22 0.038±0.02 0.189±0.10
ENSMUST00000139505 N/A N/A N/A 0.509±0.00 N/A N/A 0.049±0.00 0.061±0.00 0.016±0.01 N/A 0.418±0.19 0.443±0.15 0.135±0.14 0.814±0.00

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