C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 219
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000022716 Rnf219-201 ENSMUSG00000022120 10090 - 14:104477534-104522666 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000022716
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000022716 1.683±0.95 1.279±0.23 2.630±0.15 4.870±0.85 1.256±0.20 1.759±0.24 0.863±0.24 0.959±0.13 1.336±1.16 2.007±0.23 0.627±0.10 4.304±0.86 1.344±0.51 2.865±0.80

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081V CIL_00081V_0002 VISTA 14:103890395-104491968
CIL_00097M CIL_00097M_0002 VISTA 14:103997360-104598672
CIL_0007M3 CIL_0007M3_0002 UCNEbase 14:104145568-105070718
CIL_0000U2 CIL_0000U2_0002 CGP 14:104461676-104522666
CIL_0002EJ CIL_0002EJ_0002 CGP 14:104477534-105177327

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008270 IEA zinc ion binding
GO:0048026 IMP positive regulation of mRNA splicing, via spliceosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000282003 RNF219-001 protein_coding Homo_sapiens 0 2023

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