C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008BG_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs251 VISTA 9606 3:18502876-19103900
GeneTranscriptPositionBiotype
ENSG00000228956 (SATB1-AS1)
SATB1 antisense RNA 1 		ENST00000414198 (SATB1-AS1-001) 18445024-18526508 antisense
ENST00000425799 (SATB1-AS1-022) 18693887-18917692 antisense
ENST00000438418 (SATB1-AS1-002) 18462811-18466009 retained_intron
ENST00000453361 (SATB1-AS1-021) 18745744-18747491 antisense
ENST00000456253 (SATB1-AS1-005) 18465983-18585762 antisense
ENST00000593444 (SATB1-AS1-008) 18465992-18530154 antisense
ENST00000593741 (SATB1-AS1-003) 18464330-18530394 antisense
ENST00000595250 (SATB1-AS1-010) 18465983-18585762 antisense
ENST00000595388 (SATB1-AS1-020) 18465983-18764059 antisense
ENST00000595865 (SATB1-AS1-009) 18465983-18591770 antisense
ENST00000596139 (SATB1-AS1-016) 18527172-18607187 antisense
ENST00000596152 (SATB1-AS1-019) 18526396-18625427 antisense
ENST00000596277 (SATB1-AS1-012) 18465983-18534762 antisense
ENST00000596307 (SATB1-AS1-013) 18465983-18591737 antisense
ENST00000596850 (SATB1-AS1-018) 18465983-18530049 antisense
ENST00000598149 (SATB1-AS1-004) 18445237-18469702 antisense
ENST00000598390 (SATB1-AS1-014) 18465983-18591984 antisense
ENST00000598498 (SATB1-AS1-007) 18465983-18534897 antisense
ENST00000598688 (SATB1-AS1-006) 18465983-18535024 antisense
ENST00000598740 (SATB1-AS1-011) 18465983-18527638 antisense
ENST00000599762 (SATB1-AS1-015) 18465983-18604241 antisense
ENST00000600177 (SATB1-AS1-017) 18527172-18607184 antisense
ENST00000609327 (SATB1-AS1-024) 18463662-18466009 retained_intron
ENST00000610002 (SATB1-AS1-023) 18462811-18466004 retained_intron
ENST00000616514 (SATB1-AS1-025) 18525791-18527231 retained_intron
ENSG00000236570 (RAD23BP1)
RAD23 homolog B (S. cerevisiae) pseudogene 1 		ENST00000421404 (RAD23BP1-001) 18538673-18539899 processed_pseudogene
CIL_0008BG_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs251 VISTA 10090 17:51925510-52526530
GeneTranscriptPositionBiotype
ENSMUSG00000100150 (RP23-307A6.1)
predicted gene, 19585 		ENSMUST00000186007 (RP23-307A6.1-001) 52149289-52163048 lincRNA
ENSMUST00000191539 (RP23-307A6.1-002) 52160143-52162844 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008BG_0001ENSG00000228956ENST00000414198ENST00000425799ENST00000438418ENST00000453361ENST00000456253ENST00000593444ENST00000593741ENST00000595250ENST00000595388ENST00000595865ENST00000596139ENST00000596152ENST00000596277ENST00000596307ENST00000596850ENST00000598149ENST00000598390ENST00000598498ENST00000598688ENST00000598740ENST00000599762ENST00000600177ENST00000609327ENST00000610002ENST00000616514ENSG00000236570ENST00000421404CIL_0008BG_0002ENSMUSG00000100150ENSMUST00000186007ENSMUST00000191539
Region; Gene Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008BG_0001ENSG00000228956ENST00000414198ENST00000425799ENST00000438418ENST00000593444ENST00000593741ENST00000595250ENST00000596277ENST00000596307ENST00000596850ENST00000598149ENST00000598390ENST00000598498ENST00000599762ENST00000609327ENST00000616514ENSG00000236570ENST00000421404CIL_0008BG_0002ENSMUSG00000100150ENSMUST00000186007ENSMUST00000191539
Gene Transcript Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000228956 ENST00000414198 N/A N/A N/A N/A 1.041±0.00 N/A N/A N/A N/A N/A N/A N/A 0.121±0.00
ENST00000425799 N/A N/A N/A N/A N/A N/A 1.204±0.00 N/A N/A N/A 0.107±0.02 N/A 0.099±0.03
ENST00000438418 N/A N/A 0.157±0.00 0.096±0.07 N/A N/A N/A N/A N/A N/A 0.016±0.00 N/A 0.032±0.00
ENST00000453361 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000456253 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593444 N/A N/A N/A N/A 1.006±0.00 N/A N/A 0.029±0.00 N/A N/A N/A 0.159±0.00 N/A
ENST00000593741 0.454±0.00 0.155±0.00 N/A 0.213±0.17 N/A N/A N/A 0.619±0.00 0.585±0.06 N/A 0.036±0.00 0.051±0.00 0.038±0.00
ENST00000595250 N/A N/A N/A N/A 1.048±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000595388 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000595865 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596139 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596152 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596277 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.056±0.00 N/A N/A
ENST00000596307 0.587±0.00 N/A N/A 0.164±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596850 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.091±0.00
ENST00000598149 N/A N/A 0.250±0.00 0.155±0.09 1.304±0.00 0.012±0.00 0.435±0.00 N/A 0.917±0.00 N/A N/A N/A 0.103±0.00
ENST00000598390 N/A N/A 1.412±1.09 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000598498 N/A N/A N/A N/A N/A 0.014±0.00 N/A N/A N/A N/A 0.024±0.00 0.089±0.00 0.099±0.00
ENST00000598688 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000598740 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000599762 N/A N/A 1.347±1.05 N/A N/A N/A N/A N/A N/A N/A N/A 0.088±0.00 N/A
ENST00000600177 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000609327 N/A N/A N/A N/A 0.388±0.00 0.083±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000610002 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000616514 N/A N/A N/A N/A N/A 0.138±0.00 N/A N/A N/A 0.113±0.00 N/A N/A N/A
ENSG00000236570 ENST00000421404 0.011±0.00 N/A 0.147±0.09 0.026±0.01 0.010±0.00 0.019±0.00 N/A 0.107±0.00 0.038±0.03 0.055±0.00 N/A N/A 0.019±0.00
Gene Transcript Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000100150 ENSMUST00000186007 N/A 0.216±0.04 0.052±0.00 0.301±0.12 N/A N/A 0.099±0.01 0.062±0.06 0.193±0.09 0.065±0.00 0.174±0.12 0.079±0.00 N/A
ENSMUST00000191539 N/A N/A N/A 0.832±0.35 N/A N/A N/A N/A N/A 0.186±0.00 N/A N/A N/A

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