C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAD23 homolog B (S. cerevisiae) pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000421404 RAD23BP1-001 ENSG00000236570 9606 + 3:18538673-18539899 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartLiverLungMuscleTestisENST00000421404
Transcript ID Adrenal Brain Breast Colon Heart Liver Lung Muscle Testis
ENST00000421404 0.011±0.00 0.147±0.09 0.026±0.01 0.010±0.00 0.019±0.00 0.107±0.00 0.038±0.03 0.055±0.00 0.019±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007OK CIL_0007OK_0001 UCNEbase 3:17286171-18992888
CIL_0004HR CIL_0004HR_0001 CGP 3:18345387-19535646
CIL_0008BG CIL_0008BG_0001 VISTA 3:18502876-19103900

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030134 Rad23b-001 protein_coding Mus_musculus 0 1109
ENSMUST00000156263 Rad23b-003 processed_transcript Mus_musculus 0 571
ENSMUST00000174329 Gm4287-001 processed_pseudogene Mus_musculus 0 379
ENSMUST00000127266 Rad23b-002 processed_transcript Mus_musculus 6e-31 139

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