C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008DV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1496 VISTA 9606 2:5109485-5712892
GeneTranscriptPositionBiotype
ENSG00000176887 (SOX11)
SRY (sex determining region Y)-box 11 		ENST00000322002 (SOX11-001) 5692667-5701385 protein_coding
ENSG00000224128 (LINC01248)
long intergenic non-protein coding RNA 1248 		ENST00000458264 (LINC01248-001) 5602505-5691488 antisense
ENSG00000232835 (AC107057.1)
 ENST00000425763 (AC107057.1-001) 5549780-5556031 lincRNA
ENSG00000242540 (AC010729.1)
 ENST00000455579 (AC010729.1-001) 5696220-5708095 3prime_overlapping_ncrna

Homo sapiens Ensembl (GRCh38)

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Structures from Ensembl
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CIL_0008DV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1496 VISTA 10090 12:27263452-27866844
GeneTranscriptPositionBiotype
ENSMUSG00000063632 (Sox11)
SRY (sex determining region Y)-box 11 		ENSMUST00000079063 (Sox11-001) 27334264-27342574 protein_coding

Mus musculus Ensembl (GRCm38)

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Structures from Ensembl
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008DV_0001ENSG00000176887ENST00000322002ENSG00000224128ENST00000458264ENSG00000232835ENST00000425763ENSG00000242540ENST00000455579CIL_0008DV_0002ENSMUSG00000063632ENSMUST00000079063
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008DV_0001ENSG00000176887ENST00000322002ENSG00000224128ENST00000458264ENSG00000232835ENST00000425763ENSG00000242540ENST00000455579CIL_0008DV_0002ENSMUSG00000063632ENSMUST00000079063
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000176887 ENST00000322002 0.014±0.00 0.047±0.00 N/A 0.352±0.06 0.101±0.06 0.376±0.19 0.126±0.02 0.039±0.00 0.019±0.00 0.025±0.01 0.043±0.00 0.060±0.05 0.025±0.01 0.049±0.00
ENSG00000224128 ENST00000458264 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.462±0.32
ENSG00000232835 ENST00000425763 N/A N/A N/A 0.057±0.00 N/A N/A N/A 0.371±0.00 N/A N/A N/A N/A N/A 0.175±0.02
ENSG00000242540 ENST00000455579 N/A 0.068±0.00 N/A N/A N/A N/A 0.137±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000063632 ENSMUST00000079063 0.055±0.02 0.110±0.05 0.176±0.03 71.149±50.58 0.100±0.04 0.040±0.03 0.011±0.00 0.049±0.02 0.258±0.28 4.662±0.47 0.011±0.00 0.816±0.39 0.584±0.56 0.145±0.07

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