C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008EB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm472 VISTA 9606 4:139508122-140109241
GeneTranscriptPositionBiotype
ENSG00000085871 (MGST2)
microsomal glutathione S-transferase 2 		ENST00000265498 (MGST2-001) 139665768-139704253 protein_coding
ENST00000502587 (MGST2-005) 139665997-139679124 retained_intron
ENST00000503816 (MGST2-002) 139666016-139731435 nonsense_mediated_decay
ENST00000506797 (MGST2-006) 139665835-139704224 protein_coding
ENST00000515067 (MGST2-004) 139666028-139704068 processed_transcript
ENST00000515137 (MGST2-003) 139665933-139740745 processed_transcript
ENST00000616265 (MGST2-201) 139665768-139740745 protein_coding
ENSG00000145391 (SETD7)
SET domain containing (lysine methyltransferase) 7 		ENST00000274031 (SETD7-001) 139506036-139556774 protein_coding
ENST00000404104 (SETD7-002) 139532579-139556769 protein_coding
ENST00000406354 (SETD7-003) 139532582-139556208 protein_coding
ENST00000506866 (SETD7-004) 139495941-139556238 protein_coding
ENST00000515101 (SETD7-006) 139496089-139520396 retained_intron
ENST00000608795 (SETD7-008) 139533231-139606699 protein_coding
ENST00000608958 (SETD7-009) 139596608-139606699 protein_coding
ENSG00000178458 (H3F3AP6)
H3 histone, family 3A, pseudogene 6 		ENST00000230495 (H3F3AP6-001) 139698144-139698554 processed_pseudogene
ENSG00000201533 (RN7SKP237)
RNA, 7SK small nuclear pseudogene 237 		ENST00000364663 (RN7SKP237-201) 139685127-139685427 misc_RNA
ENSG00000249302 (FTH1P24)
ferritin, heavy polypeptide 1 pseudogene 24 		ENST00000503502 (FTH1P24-001) 139546266-139546727 processed_pseudogene
ENSG00000252233 (RN7SKP253)
RNA, 7SK small nuclear pseudogene 253 		ENST00000516424 (RN7SKP253-201) 139794125-139794433 misc_RNA
ENSG00000261268 (RP11-308D13.3)
 ENST00000561977 (RP11-308D13.3-001) 139618136-139623232 lincRNA
ENSG00000272717 (RP11-342I1.2)
 ENST00000608402 (RP11-342I1.2-001) 139556799-139557643 antisense

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0008EB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm472 VISTA 10090 3:51478044-52079171
GeneTranscriptPositionBiotype
ENSMUSG00000027739 (Rab33b)
RAB33B, member RAS oncogene family 		ENSMUST00000054387 (Rab33b-001) 51483966-51495905 protein_coding
ENSMUSG00000037111 (Setd7)
SET domain containing (lysine methyltransferase) 7 		ENSMUST00000037141 (Setd7-001) 51515319-51560878 protein_coding
ENSMUST00000161755 (Setd7-002) 51535501-51536596 processed_transcript
ENSMUSG00000061143 (Maml3)
mastermind like 3 (Drosophila) 		ENSMUST00000118075 (Maml3-002) 51689437-51796535 protein_coding
ENSMUST00000121440 (Maml3-001) 51687611-52104891 protein_coding
ENSMUSG00000065070 (n-R5s196)
nuclear encoded rRNA 5S 196 		ENSMUST00000083136 (n-R5s196-201) 51828912-51829028 rRNA
ENSMUSG00000074603 (Gm10729)
predicted gene 10729 		ENSMUST00000099104 (Gm10729-201) 51693771-51695090 protein_coding
ENSMUSG00000074604 (Mgst2)
microsomal glutathione S-transferase 2 		ENSMUST00000099106 (Mgst2-001) 51661179-51682675 protein_coding
ENSMUST00000159400 (Mgst2-009) 51671466-51682670 processed_transcript
ENSMUST00000159554 (Mgst2-005) 51677560-51682674 processed_transcript
ENSMUST00000160753 (Mgst2-003) 51660360-51681807 processed_transcript
ENSMUST00000161230 (Mgst2-002) 51675136-51682674 retained_intron
ENSMUST00000161590 (Mgst2-008) 51661227-51682670 protein_coding
ENSMUST00000161627 (Mgst2-006) 51661178-51677076 processed_transcript
ENSMUST00000162125 (Mgst2-004) 51671915-51682519 processed_transcript
ENSMUST00000162195 (Mgst2-007) 51661215-51662970 processed_transcript
ENSMUSG00000097885 (5031434O11Rik)
RIKEN cDNA 5031434O11 gene 		ENSMUST00000180404 (5031434O11Rik-201) 51560036-51567114 lincRNA
ENSMUST00000180616 (5031434O11Rik-202) 51559757-51567117 lincRNA
ENSMUST00000181303 (5031434O11Rik-203) 51562471-51567105 lincRNA

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008EB_0001ENSG00000085871ENST00000265498ENST00000502587ENST00000503816ENST00000506797ENST00000515067ENST00000515137ENST00000616265ENSG00000145391ENST00000274031ENST00000404104ENST00000406354ENST00000506866ENST00000515101ENST00000608795ENST00000608958ENSG00000178458ENST00000230495ENSG00000201533ENST00000364663ENSG00000249302ENST00000503502ENSG00000252233ENST00000516424ENSG00000261268ENST00000561977ENSG00000272717ENST00000608402CIL_0008EB_0002ENSMUSG00000027739ENSMUST00000054387ENSMUSG00000037111ENSMUST00000037141ENSMUST00000161755ENSMUSG00000061143ENSMUST00000118075ENSMUST00000121440ENSMUSG00000065070ENSMUST00000083136ENSMUSG00000074603ENSMUST00000099104ENSMUSG00000074604ENSMUST00000099106ENSMUST00000159400ENSMUST00000159554ENSMUST00000160753ENSMUST00000161230ENSMUST00000161590ENSMUST00000161627ENSMUST00000162125ENSMUST00000162195ENSMUSG00000097885ENSMUST00000180404ENSMUST00000180616ENSMUST00000181303
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008EB_0001ENSG00000085871ENST00000265498ENST00000506797ENST00000515067ENSG00000145391ENST00000274031ENST00000608958ENSG00000178458ENST00000230495ENSG00000201533ENST00000364663ENSG00000249302ENST00000503502ENSG00000252233ENST00000516424ENSG00000261268ENST00000561977ENSG00000272717ENST00000608402CIL_0008EB_0002ENSMUSG00000027739ENSMUST00000054387ENSMUSG00000037111ENSMUST00000037141ENSMUSG00000061143ENSMUST00000118075ENSMUST00000121440ENSMUSG00000065070ENSMUST00000083136ENSMUSG00000074603ENSMUST00000099104ENSMUSG00000074604ENSMUST00000099106ENSMUST00000159400ENSMUST00000159554ENSMUST00000160753ENSMUST00000161230ENSMUST00000161590ENSMUST00000161627ENSMUST00000162125ENSMUSG00000097885ENSMUST00000180404
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000085871 ENST00000265498 43.165±0.00 44.720±0.00 N/A 3.878±1.05 29.001±0.00 27.642±19.30 20.634±15.57 31.090±3.48 40.648±36.82 9.505±5.60 3.961±2.03 22.311±9.64 41.309±23.65 25.670±18.67
ENST00000502587 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503816 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506797 N/A N/A 4.485±0.00 3.355±0.00 5.930±0.00 N/A 22.893±0.00 N/A N/A 12.105±0.00 3.914±0.00 36.095±0.00 13.436±0.00 19.718±0.00
ENST00000515067 N/A N/A N/A N/A N/A N/A N/A N/A 36.112±0.00 N/A 4.393±1.36 N/A N/A N/A
ENST00000515137 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000616265 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000145391 ENST00000274031 13.498±0.00 8.172±0.00 0.799±0.00 3.729±2.40 25.361±0.00 9.394±4.38 8.209±5.63 7.137±0.61 8.406±3.26 6.655±0.00 12.373±2.37 3.751±1.49 3.892±1.80 4.093±2.75
ENST00000404104 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000406354 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506866 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515101 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000608795 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000608958 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.878±0.00
ENSG00000178458 ENST00000230495 0.148±0.00 0.310±0.00 0.208±0.00 0.173±0.00 0.833±0.62 0.811±0.71 N/A 1.562±1.45 0.047±0.00 0.050±0.00 0.045±0.00 0.145±0.00 0.322±0.20 0.095±0.00
ENSG00000201533 ENST00000364663 0.067±0.00 0.716±0.00 N/A 0.080±0.00 0.529±0.00 1.022±0.00 0.194±0.00 0.805±0.59 1.914±0.00 N/A N/A 1.739±0.00 N/A 0.394±0.00
ENSG00000249302 ENST00000503502 N/A 0.032±0.00 0.529±0.00 N/A 1.119±0.00 0.387±0.00 0.362±0.00 N/A 0.871±0.00 N/A 1.662±0.00 0.849±0.00 N/A N/A
ENSG00000252233 ENST00000516424 N/A N/A N/A N/A 0.503±0.00 1.155±0.00 N/A N/A 1.067±0.95 N/A N/A N/A N/A N/A
ENSG00000261268 ENST00000561977 N/A N/A N/A N/A N/A N/A N/A N/A 0.127±0.00 N/A N/A 0.155±0.00 0.036±0.00 N/A
ENSG00000272717 ENST00000608402 0.060±0.00 0.405±0.00 N/A 0.409±0.00 0.266±0.00 0.212±0.00 0.182±0.03 N/A N/A 0.228±0.00 0.056±0.00 0.203±0.15 0.112±0.03 0.220±0.07
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027739 ENSMUST00000054387 6.214±1.00 8.093±0.99 12.798±1.17 4.853±1.47 7.299±2.77 7.073±1.06 2.345±0.17 4.787±0.40 2.378±0.34 10.949±0.70 2.133±0.14 7.924±2.89 6.593±2.13 2.440±1.01
ENSMUSG00000037111 ENSMUST00000037141 19.737±1.60 14.215±0.83 23.785±4.52 6.803±3.91 17.020±2.38 13.816±2.20 11.288±0.55 7.393±0.16 1.441±0.49 15.271±0.30 53.548±1.93 20.090±6.91 8.380±4.94 0.828±0.34
ENSMUST00000161755 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000061143 ENSMUST00000118075 N/A 1.429±0.12 N/A N/A N/A 2.221±0.37 N/A N/A 0.118±0.03 N/A N/A 2.676±0.80 17.597±2.92 0.538±0.00
ENSMUST00000121440 1.083±0.52 3.603±0.24 1.999±0.40 2.913±1.72 1.684±0.79 4.146±0.45 0.858±0.16 1.565±0.25 0.439±0.24 5.590±0.64 0.468±0.12 3.176±0.63 8.698±4.31 0.258±0.11
ENSMUSG00000065070 ENSMUST00000083136 N/A N/A N/A N/A N/A N/A N/A 1606.070±0.00 N/A N/A N/A N/A N/A N/A
ENSMUSG00000074603 ENSMUST00000099104 0.026±0.00 0.056±0.00 0.188±0.07 0.108±0.07 0.069±0.01 0.144±0.05 0.023±0.00 0.047±0.01 0.038±0.01 0.192±0.14 N/A 0.117±0.06 0.150±0.04 0.159±0.10
ENSMUSG00000074604 ENSMUST00000099106 1.576±0.59 1.919±0.64 6.473±1.54 N/A 1.772±0.64 7.847±1.49 0.211±0.09 0.136±0.06 2.959±0.68 1.040±0.21 0.319±0.07 9.013±14.34 6.136±4.14 N/A
ENSMUST00000159400 0.394±0.00 N/A N/A 0.060±0.04 N/A N/A 0.103±0.03 0.071±0.00 0.087±0.00 N/A N/A 0.359±0.00 0.965±0.00 1.163±0.00
ENSMUST00000159554 N/A N/A N/A N/A N/A N/A N/A 0.246±0.00 N/A N/A 0.427±0.13 N/A 7.201±0.55 10.260±0.00
ENSMUST00000160753 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.440±0.00 N/A N/A N/A
ENSMUST00000161230 0.212±0.08 1.473±0.46 2.879±1.89 0.018±0.01 0.731±0.23 5.071±1.26 0.057±0.05 0.052±0.02 0.482±0.31 0.604±0.23 0.080±0.05 1.314±2.42 0.876±0.84 0.845±0.37
ENSMUST00000161590 N/A N/A N/A N/A N/A N/A N/A 0.108±0.00 N/A N/A 0.303±0.12 N/A 2.246±0.51 N/A
ENSMUST00000161627 N/A N/A N/A N/A N/A N/A N/A 0.170±0.01 N/A N/A N/A 0.544±0.14 2.984±0.27 N/A
ENSMUST00000162125 N/A N/A N/A N/A N/A N/A 0.398±0.00 N/A N/A N/A 0.188±0.00 0.988±0.05 N/A N/A
ENSMUST00000162195 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000097885 ENSMUST00000180404 N/A 3.079±0.12 N/A 1.735±0.06 3.849±0.27 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000180616 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000181303 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Loading