C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB33B, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000054387 Rab33b-001 ENSMUSG00000027739 10090 + 3:51483966-51495905 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000054387
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000054387 6.214±1.00 8.093±0.99 12.798±1.17 4.853±1.47 7.299±2.77 7.073±1.06 2.345±0.17 4.787±0.40 2.378±0.34 10.949±0.70 2.133±0.14 7.924±2.89 6.593±2.13 2.440±1.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005KM CIL_0005KM_0002 CGP 3:51416016-51495905
CIL_0008LB CIL_0008LB_0002 VISTA 3:51425540-52029617
CIL_0008EB CIL_0008EB_0002 VISTA 3:51478044-52079171
CIL_0004PE CIL_0004PE_0002 CGP 3:51483966-51560878

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005794 IEA Golgi apparatus
GO:0005796 IDA Golgi lumen
GO:0006914 IEA autophagy
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0070062 IEA extracellular vesicular exosome
GO:1903434 IEA negative regulation of constitutive secretory pathway
GO:2000156 ISS regulation of retrograde vesicle-mediated transport, Golgi to ER
GO:2000785 IMP regulation of autophagic vacuole assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000305626 RAB33B-001 protein_coding Homo_sapiens 0 822

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