C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008F9_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs100 VISTA 9606 16:25914889-26516026
GeneTranscriptPositionBiotype
ENSG00000182601 (HS3ST4)
heparan sulfate (glucosamine) 3-O-sulfotransferase 4 		ENST00000331351 (HS3ST4-001) 25692026-26137688 protein_coding
ENST00000475436 (HS3ST4-002) 25886746-26136207 processed_transcript
ENSG00000228480 (AC130464.1)
 ENST00000416201 (AC130464.1-001) 26354796-26358355 unprocessed_pseudogene
ENSG00000230330 (HMGN2P3)
high mobility group nucleosomal binding domain 2 pseudogene 3 		ENST00000433603 (HMGN2P3-001) 26032539-26032811 processed_pseudogene
ENSG00000231876 (AC009158.1)
 ENST00000417476 (AC009158.1-001) 26318146-26334428 lincRNA
ENST00000432973 (AC009158.1-003) 26322228-26334390 lincRNA
ENST00000452511 (AC009158.1-002) 26318146-26322981 lincRNA
ENST00000595007 (AC009158.1-004) 26318107-26322544 lincRNA
ENST00000596241 (AC009158.1-006) 26322512-26323065 lincRNA
ENST00000598600 (AC009158.1-005) 26318129-26322544 lincRNA
ENST00000609586 (AC009158.1-007) 26318107-26321341 lincRNA
ENSG00000237140 (HSPE1P16)
heat shock 10kDa protein 1 pseudogene 16 		ENST00000426640 (HSPE1P16-001) 26062750-26063097 processed_pseudogene
CIL_0008F9_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs100 VISTA 10090 7:124202182-124803492
GeneTranscriptPositionBiotype
ENSMUSG00000078591 (Hs3st4)
heparan sulfate (glucosamine) 3-O-sulfotransferase 4 		ENSMUST00000106437 (Hs3st4-001) 123982869-124398989 protein_coding
ENSMUSG00000085892 (Gm15339)
predicted gene 15339 		ENSMUST00000153577 (Gm15339-001) 124476541-124494301 lincRNA
ENSMUSG00000085899 (Gm15338)
predicted gene 15338 		ENSMUST00000151884 (Gm15338-001) 124186718-124290270 sense_intronic
ENSMUSG00000086254 (3100003L05Rik)
RIKEN cDNA 3100003L05 gene 		ENSMUST00000130240 (3100003L05Rik-001) 124625670-124708935 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008F9_0001ENSG00000182601ENST00000331351ENST00000475436ENSG00000228480ENST00000416201ENSG00000230330ENST00000433603ENSG00000231876ENST00000417476ENST00000432973ENST00000452511ENST00000595007ENST00000596241ENST00000598600ENST00000609586ENSG00000237140ENST00000426640CIL_0008F9_0002ENSMUSG00000078591ENSMUST00000106437ENSMUSG00000085892ENSMUST00000153577ENSMUSG00000085899ENSMUST00000151884ENSMUSG00000086254ENSMUST00000130240
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008F9_0001ENSG00000182601ENST00000331351ENST00000475436ENSG00000228480ENST00000416201ENSG00000230330ENST00000433603ENSG00000231876ENST00000417476ENST00000432973ENST00000452511ENST00000598600ENST00000609586ENSG00000237140ENST00000426640CIL_0008F9_0002ENSMUSG00000078591ENSMUST00000106437ENSMUSG00000085892ENSMUST00000153577ENSMUSG00000085899ENSMUST00000151884ENSMUSG00000086254ENSMUST00000130240
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000182601 ENST00000331351 N/A N/A N/A 7.829±6.85 0.457±0.00 0.025±0.00 N/A N/A N/A 0.012±0.00 N/A 0.023±0.01 0.022±0.00 0.379±0.09
ENST00000475436 N/A N/A N/A N/A N/A N/A N/A N/A 0.074±0.00 N/A 0.565±0.00 N/A N/A N/A
ENSG00000228480 ENST00000416201 N/A N/A N/A N/A N/A 0.076±0.00 N/A N/A N/A N/A N/A N/A N/A 0.019±0.00
ENSG00000230330 ENST00000433603 0.066±0.00 0.074±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000231876 ENST00000417476 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.403±0.00
ENST00000432973 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.123±0.00
ENST00000452511 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.246±0.00
ENST00000595007 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596241 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000598600 0.017±0.00 0.017±0.00 N/A N/A N/A 0.077±0.00 N/A N/A 0.015±0.00 0.062±0.00 N/A N/A N/A N/A
ENST00000609586 0.129±0.00 0.204±0.00 N/A 0.144±0.00 0.070±0.00 0.188±0.00 0.195±0.00 0.070±0.00 N/A 0.070±0.00 N/A 1.002±0.00 N/A N/A
ENSG00000237140 ENST00000426640 N/A N/A N/A 0.063±0.00 0.031±0.00 N/A N/A N/A N/A N/A 0.059±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000078591 ENSMUST00000106437 0.056±0.02 0.030±0.01 0.009±0.00 7.468±4.01 0.033±0.00 0.033±0.02 0.024±0.01 0.011±0.00 0.007±0.01 0.022±0.01 0.019±0.00 0.038±0.02 0.033±0.02 0.696±0.00
ENSMUSG00000085892 ENSMUST00000153577 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.129±0.06
ENSMUSG00000085899 ENSMUST00000151884 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.328±0.00
ENSMUSG00000086254 ENSMUST00000130240 N/A N/A 0.014±0.00 0.107±0.05 N/A 0.468±0.21 N/A 0.064±0.00 N/A N/A 0.064±0.00 0.555±0.11 N/A 0.070±0.00

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