C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heparan sulfate (glucosamine) 3-O-sulfotransferase 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000331351 HS3ST4-001 ENSG00000182601 9606 + 16:25692026-26137688 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonLungOvaryPlacentaTestisENST00000331351
Transcript ID Brain Breast Colon Lung Ovary Placenta Testis
ENST00000331351 7.829±6.85 0.457±0.00 0.025±0.00 0.012±0.00 0.023±0.01 0.022±0.00 0.379±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003X1 CIL_0003X1_0001 CGP 16:25236001-26137688
CIL_0008RH CIL_0008RH_0001 VISTA 16:25447894-26049208

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005794 IEA Golgi apparatus
GO:0008146 IEA sulfotransferase activity
GO:0008467 NAS [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity
GO:0016021 IEA integral component of membrane
GO:0030201 NAS heparan sulfate proteoglycan metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106437 Hs3st4-001 protein_coding Mus_musculus 0 1633

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