C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: heparan sulfate (glucosamine) 3-O-sulfotransferase 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000182601 HS3ST4 9606 + 16:25692026-26137688 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000331351 HS3ST4-001 25692026-26137688 protein_coding
  ENST00000475436 HS3ST4-002 25886746-26136207 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonLiverLungMuscleOvaryPlacentaTestisENST00000331351ENST00000475436
Transcript ID Brain Breast Colon Liver Lung Muscle Ovary Placenta Testis
ENST00000331351 7.829±6.85 0.457±0.00 0.025±0.00 N/A 0.012±0.00 N/A 0.023±0.01 0.022±0.00 0.379±0.09
ENST00000475436 N/A N/A N/A 0.074±0.00 N/A 0.565±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003X1 CIL_0003X1_0001 CGP 16:25236001-26137688
CIL_0008RH CIL_0008RH_0001 VISTA 16:25447894-26049208

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005794 IEA Golgi apparatus
GO:0008146 IEA sulfotransferase activity
GO:0008467 NAS [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity
GO:0016021 IEA integral component of membrane
GO:0030201 NAS heparan sulfate proteoglycan metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000052648 hs3st4 heparan sulfate (glucosamine) 3-O-sulfotransferase 4 protein_coding Danio_rerio
ENSMUSG00000078591 Hs3st4 heparan sulfate (glucosamine) 3-O-sulfotransferase 4 protein_coding Mus_musculus

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