C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008GB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1780 VISTA 9606 1:188107592-188708921
GeneTranscriptPositionBiotype
ENSG00000222240 (RN7SKP156)
RNA, 7SK small nuclear pseudogene 156 		ENST00000410308 (RN7SKP156-201) 188155839-188156180 misc_RNA
ENSG00000225006 (RP11-669M2.1)
 ENST00000426262 (RP11-669M2.1-001) 188508538-188536465 lincRNA
ENSG00000231022 (RPS3AP9)
ribosomal protein S3a pseudogene 9 		ENST00000417027 (RPS3AP9-001) 188694320-188695111 processed_pseudogene
ENSG00000235083 (RP11-669M2.2)
 ENST00000446368 (RP11-669M2.2-001) 188671353-188671759 processed_pseudogene
ENSG00000261182 (RP11-201A3.1)
 ENST00000569873 (RP11-201A3.1-001) 188218400-188220676 lincRNA
CIL_0008GB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1780 VISTA 10090 1:148182150-148783265
GeneTranscriptPositionBiotype
ENSMUSG00000099629 (RP23-201B13.1)
predicted gene 29515 		ENSMUST00000188273 (RP23-201B13.1-001) 148234517-148248378 lincRNA
ENSMUSG00000101735 (RP24-279G1.1)
predicted gene, 18505 		ENSMUST00000187360 (RP24-279G1.1-001) 148650345-148651134 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; BrainBreastColonHeartKidneyOvaryTestisCIL_0008GB_0001ENSG00000222240ENST00000410308ENSG00000225006ENST00000426262ENSG00000231022ENST00000417027ENSG00000235083ENST00000446368ENSG00000261182ENST00000569873CIL_0008GB_0002ENSMUSG00000099629ENSMUST00000188273ENSMUSG00000101735ENSMUST00000187360
Region; Gene Transcript'; BrainBreastColonHeartKidneyOvaryTestisCIL_0008GB_0001ENSG00000222240ENST00000410308ENSG00000225006ENST00000426262ENSG00000231022ENST00000417027ENSG00000235083ENST00000446368ENSG00000261182ENST00000569873CIL_0008GB_0002ENSMUSG00000099629ENSMUST00000188273ENSMUSG00000101735ENSMUST00000187360
Gene Transcript Brain Breast Colon Heart Kidney Ovary Testis
ENSG00000222240 ENST00000410308 N/A N/A N/A 0.095±0.00 N/A N/A N/A
ENSG00000225006 ENST00000426262 N/A N/A N/A N/A N/A N/A 0.036±0.00
ENSG00000231022 ENST00000417027 N/A 0.011±0.00 0.011±0.00 0.033±0.00 0.012±0.00 0.013±0.00 N/A
ENSG00000235083 ENST00000446368 N/A N/A N/A N/A N/A N/A 0.044±0.00
ENSG00000261182 ENST00000569873 N/A N/A N/A N/A N/A N/A 0.023±0.00
Gene Transcript Brain Breast Colon Heart Kidney Ovary Testis
ENSMUSG00000099629 ENSMUST00000188273 N/A N/A N/A N/A N/A N/A 0.027±0.01
ENSMUSG00000101735 ENSMUST00000187360 0.023±0.00 N/A N/A N/A N/A N/A N/A

Loading