C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene, 18505
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000187360 RP24-279G1.1-001 ENSMUSG00000101735 10090 - 1:148650345-148651134 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENSMUST00000187360
Transcript ID Brain
ENSMUST00000187360 0.023±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008GB CIL_0008GB_0002 VISTA 1:148182150-148783265

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000316084 RPS4X-001 protein_coding Homo_sapiens 0 654
ENST00000405151 RPS4XP9-001 processed_pseudogene Homo_sapiens 0 425
ENST00000427198 RPS4XP16-001 transcribed_processed_pseudogene Homo_sapiens 0 532
ENST00000446897 RPS4XP11-001 processed_pseudogene Homo_sapiens 0 518
ENST00000458402 RPS4XP2-001 processed_pseudogene Homo_sapiens 0 593
ENST00000460237 RPS4XP19-001 processed_pseudogene Homo_sapiens 0 394
ENST00000477670 RPS4XP6-001 processed_pseudogene Homo_sapiens 0 534
ENST00000479057 RPS4XP17-001 processed_pseudogene Homo_sapiens 0 405
ENST00000483219 RPS4XP13-001 processed_pseudogene Homo_sapiens 0 527
ENST00000486733 RPS4X-003 processed_transcript Homo_sapiens 0 351
ENST00000508013 RP11-697N18.1-001 unprocessed_pseudogene Homo_sapiens 0 427
ENST00000595905 RPS4XP16-003 processed_transcript Homo_sapiens 0 453

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