C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008JB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1228 VISTA 9606 9:80796778-81397867
GeneTranscriptPositionBiotype
ENSG00000226798 (RP11-289F5.1)
 ENST00000397864 (RP11-289F5.1-001) 80869758-80871295 lincRNA
CIL_0008JB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1228 VISTA 10090 4:71166275-71767327
GeneTranscriptPositionBiotype
ENSMUSG00000066141 (Gm11232)
predicted gene 11232 		ENSMUST00000084489 (Gm11232-001) 71755643-71757965 protein_coding
ENSMUSG00000082432 (Gm11231)
predicted gene 11231 		ENSMUST00000117895 (Gm11231-001) 71678013-71679718 processed_pseudogene
ENSMUSG00000083914 (Rps18-ps1)
ribosomal protein S18, pseudogene 1 		ENSMUST00000120838 (Rps18-ps1-001) 71370738-71371196 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008JB_0001ENSG00000226798ENST00000397864CIL_0008JB_0002ENSMUSG00000066141ENSMUST00000084489ENSMUSG00000082432ENSMUST00000117895ENSMUSG00000083914ENSMUST00000120838
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008JB_0001ENSG00000226798ENST00000397864CIL_0008JB_0002ENSMUSG00000066141ENSMUST00000084489ENSMUSG00000082432ENSMUST00000117895ENSMUSG00000083914ENSMUST00000120838
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000226798 ENST00000397864 N/A 0.308±0.00 N/A 0.094±0.00 0.128±0.00 0.109±0.00 N/A 0.113±0.04 0.033±0.00 0.109±0.00 0.011±0.00 0.015±0.00 N/A 0.055±0.02
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000066141 ENSMUST00000084489 0.346±0.24 N/A 0.027±0.01 0.015±0.01 0.127±0.03 0.102±0.03 0.017±0.00 0.037±0.01 0.006±0.00 0.028±0.00 0.015±0.00 0.271±0.17 0.036±0.02 0.022±0.00
ENSMUSG00000082432 ENSMUST00000117895 0.019±0.00 N/A N/A 0.013±0.01 0.037±0.01 0.077±0.00 0.014±0.00 0.015±0.00 N/A N/A N/A 0.066±0.05 0.080±0.06 N/A
ENSMUSG00000083914 ENSMUST00000120838 0.736±0.19 N/A 0.288±0.02 0.083±0.03 0.202±0.07 N/A 0.096±0.00 0.133±0.06 0.324±0.11 0.220±0.00 0.154±0.01 0.538±0.29 0.562±0.41 0.172±0.08

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