C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0008LE_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1737 VISTA 9606 6:93064900-93666073
GeneTranscriptPositionBiotype
ENSG00000135333 (EPHA7)
EPH receptor A7
ENST00000369297 (EPHA7-002) 93409654-93419547 protein_coding
ENST00000369303 (EPHA7-001) 93240020-93419526 protein_coding
ENSG00000235099 (RP1-23E21.2)
ENST00000452624 (RP1-23E21.2-001) 93070387-93103384 lincRNA
CIL_0008LE_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1737 VISTA 10090 4:28562692-29163921
GeneTranscriptPositionBiotype
ENSMUSG00000028289 (Epha7)
Eph receptor A7
ENSMUST00000029964 (Epha7-001) 28813131-28967499 protein_coding
ENSMUST00000080934 (Epha7-002) 28813131-28947047 protein_coding
ENSMUST00000108191 (Epha7-004) 28813250-28967499 protein_coding
ENSMUST00000108194 (Epha7-003) 28813152-28966815 protein_coding
ENSMUST00000129029 (Epha7-007) 28871841-28943500 processed_transcript
ENSMUST00000129912 (Epha7-008) 28871924-28946334 processed_transcript
ENSMUST00000136827 (Epha7-006) 28815429-28821199 processed_transcript
ENSMUST00000149030 (Epha7-005) 28813326-28873801 processed_transcript
ENSMUSG00000080911 (Gm11918)
predicted gene 11918
ENSMUST00000121660 (Gm11918-001) 29125946-29126124 processed_pseudogene
ENSMUSG00000086339 (Gm11916)
predicted gene 11916
ENSMUST00000132759 (Gm11916-001) 29090605-29091662 lincRNA
ENSMUSG00000086774 (Gm11915)
predicted gene 11915
ENSMUST00000153669 (Gm11915-001) 28814297-28815076 antisense
ENSMUSG00000087316 (Gm11917)
predicted gene 11917
ENSMUST00000154813 (Gm11917-001) 29068079-29088811 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008LE_0001ENSG00000135333ENST00000369297ENST00000369303ENSG00000235099ENST00000452624CIL_0008LE_0002ENSMUSG00000028289ENSMUST00000029964ENSMUST00000080934ENSMUST00000108191ENSMUST00000108194ENSMUST00000129029ENSMUST00000129912ENSMUST00000136827ENSMUST00000149030ENSMUSG00000080911ENSMUST00000121660ENSMUSG00000086339ENSMUST00000132759ENSMUSG00000086774ENSMUST00000153669ENSMUSG00000087316ENSMUST00000154813
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008LE_0001ENSG00000135333ENST00000369297ENST00000369303ENSG00000235099ENST00000452624CIL_0008LE_0002ENSMUSG00000028289ENSMUST00000029964ENSMUST00000080934ENSMUST00000108191ENSMUST00000108194ENSMUST00000129029ENSMUST00000129912ENSMUST00000136827ENSMUST00000149030ENSMUSG00000080911ENSMUST00000121660ENSMUSG00000086339ENSMUST00000132759ENSMUSG00000086774ENSMUST00000153669ENSMUSG00000087316ENSMUST00000154813
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000135333 ENST00000369297 0.013±0.00 N/A N/A N/A N/A N/A 0.249±0.00 0.220±0.00 N/A N/A N/A 0.061±0.03 0.039±0.00 0.251±0.00
ENST00000369303 0.022±0.00 0.061±0.00 0.870±0.00 0.736±0.48 0.058±0.00 11.692±0.00 0.722±0.48 2.054±0.00 6.213±0.00 0.094±0.04 0.054±0.00 0.135±0.10 0.055±0.03 0.454±0.42
ENSG00000235099 ENST00000452624 N/A 0.201±0.00 N/A 0.088±0.01 0.083±0.04 0.042±0.00 0.014±0.00 0.015±0.00 0.179±0.17 N/A 0.014±0.00 0.042±0.03 0.083±0.04 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028289 ENSMUST00000029964 0.321±0.05 N/A 1.265±0.06 4.377±1.74 N/A 0.470±0.00 0.350±0.10 0.121±0.03 0.229±0.15 0.546±0.06 0.131±0.02 0.337±0.00 0.321±0.18 0.502±0.03
ENSMUST00000080934 N/A N/A N/A 3.918±0.74 0.124±0.00 0.268±0.00 N/A 0.086±0.00 0.162±0.00 N/A 0.064±0.00 N/A N/A N/A
ENSMUST00000108191 0.027±0.00 0.085±0.04 N/A 1.353±0.01 0.114±0.06 0.712±0.25 0.213±0.03 0.157±0.07 0.122±0.02 0.433±0.16 0.036±0.00 0.208±0.09 0.172±0.06 N/A
ENSMUST00000108194 0.063±0.00 0.209±0.14 N/A 6.729±0.00 0.295±0.18 0.415±0.01 N/A N/A 0.134±0.10 N/A 0.083±0.03 0.220±0.14 N/A N/A
ENSMUST00000129029 0.368±0.35 0.445±0.00 N/A N/A N/A 1.039±0.00 N/A 0.367±0.00 N/A N/A N/A 0.131±0.00 N/A N/A
ENSMUST00000129912 N/A N/A N/A N/A N/A N/A N/A N/A 0.159±0.02 N/A N/A 0.271±0.00 N/A N/A
ENSMUST00000136827 N/A 0.083±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.212±0.00 N/A N/A
ENSMUST00000149030 N/A 0.316±0.02 N/A N/A 0.056±0.02 N/A N/A N/A 0.042±0.00 N/A N/A 0.160±0.04 N/A N/A
ENSMUSG00000080911 ENSMUST00000121660 N/A N/A N/A N/A N/A N/A N/A N/A 2.994±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000086339 ENSMUST00000132759 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.204±0.21 N/A 0.129±0.05
ENSMUSG00000086774 ENSMUST00000153669 N/A N/A 0.161±0.07 0.119±0.04 N/A 0.201±0.00 0.167±0.02 N/A 0.151±0.00 N/A 0.511±0.00 0.285±0.00 0.140±0.12 N/A
ENSMUSG00000087316 ENSMUST00000154813 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.182±0.00

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