C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Eph receptor A7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000029964 Epha7-001 ENSMUSG00000028289 10090 + 4:28813131-28967499 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000029964
Transcript ID Adipose Bladder Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000029964 0.321±0.05 1.265±0.06 4.377±1.74 0.470±0.00 0.350±0.10 0.121±0.03 0.229±0.15 0.546±0.06 0.131±0.02 0.337±0.00 0.321±0.18 0.502±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008LE CIL_0008LE_0002 VISTA 4:28562692-29163921

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005004 IDA GPI-linked ephrin receptor activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005887 IC integral component of plasma membrane
GO:0007420 IMP brain development
GO:0008046 IMP axon guidance receptor activity
GO:0016310 ISS phosphorylation
GO:0018108 IEA peptidyl-tyrosine phosphorylation
GO:0022407 IDA regulation of cell-cell adhesion
GO:0030425 IEA dendrite
GO:0031290 IMP retinal ganglion cell axon guidance
GO:0031594 IEA neuromuscular junction
GO:0031952 IDA regulation of protein autophosphorylation
GO:0043025 IEA neuronal cell body
GO:0043065 IEA positive regulation of apoptotic process
GO:0043281 IDA regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0043525 IMP positive regulation of neuron apoptotic process
GO:0045211 IEA postsynaptic membrane
GO:0045499 IDA chemorepellent activity
GO:0046875 IEA ephrin receptor binding
GO:0048013 IDA ephrin receptor signaling pathway
GO:0048755 IMP branching morphogenesis of a nerve
GO:0050730 IDA regulation of peptidyl-tyrosine phosphorylation
GO:0050919 IDA negative chemotaxis
GO:0070372 ISS regulation of ERK1 and ERK2 cascade

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000102788 epha7-001 protein_coding Danio_rerio 0 1064
ENST00000369297 EPHA7-002 protein_coding Homo_sapiens 0 1352
ENST00000369303 EPHA7-001 protein_coding Homo_sapiens 0 5048

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