C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0008LU_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| hs1302 | VISTA | 9606 | 6:112201111-112805123  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000112769  (LAMA4)laminin, alpha 4 |
ENST00000230538 (LAMA4-001)
|
112108760-112254715 | protein_coding | |
|
ENST00000243219 (LAMA4-016)
|
112216402-112254538 | protein_coding | ||
|
ENST00000368638 (LAMA4-005)
|
112253361-112254588 | protein_coding | ||
|
ENST00000368640 (LAMA4-003)
|
112179766-112191764 | protein_coding | ||
|
ENST00000389463 (LAMA4-009)
|
112108874-112254600 | protein_coding | ||
|
ENST00000423735 (LAMA4-004)
|
112200133-112216449 | processed_transcript | ||
|
ENST00000424408 (LAMA4-012)
|
112109293-112254538 | protein_coding | ||
|
ENST00000431543 (LAMA4-002)
|
112213543-112254572 | protein_coding | ||
|
ENST00000453937 (LAMA4-010)
|
112253784-112254578 | protein_coding | ||
|
ENST00000455073 (LAMA4-006)
|
112253790-112254647 | protein_coding | ||
|
ENST00000518842 (LAMA4-018)
|
112188892-112191801 | retained_intron | ||
|
ENST00000519245 (LAMA4-020)
|
112135825-112139276 | retained_intron | ||
|
ENST00000519932 (LAMA4-015)
|
112207123-112254722 | protein_coding | ||
|
ENST00000521187 (LAMA4-013)
|
112171630-112179502 | retained_intron | ||
|
ENST00000521398 (LAMA4-011)
|
112185319-112254485 | protein_coding | ||
|
ENST00000521690 (LAMA4-014)
|
112216421-112254939 | protein_coding | ||
|
ENST00000521693 (LAMA4-021)
|
112122061-112130159 | retained_intron | ||
|
ENST00000521732 (LAMA4-007)
|
112179735-112191811 | protein_coding | ||
|
ENST00000522006 (LAMA4-008)
|
112108860-112254710 | protein_coding | ||
|
ENST00000523765 (LAMA4-019)
|
112142144-112165164 | nonsense_mediated_decay | ||
|
ENST00000524032 (LAMA4-017)
|
112191719-112216754 | processed_transcript | ||
|
ENST00000604740 (LAMA4-022)
|
112121775-112129988 | retained_intron | ||
|
ENSG00000215807 (KRT18P65) keratin 18 pseudogene 65 |
ENST00000439811 (KRT18P65-001)
|
112361437-112362722 | processed_pseudogene | |
|
ENSG00000217770 (FEM1AP3) fem-1 homolog a (C. elegans) pseudogene 3 |
ENST00000403722 (FEM1AP3-001)
|
112365704-112367444 | processed_pseudogene | |
|
ENSG00000219773 (RP11-506B6.3) |
ENST00000401872 (RP11-506B6.3-001)
|
112355841-112356714 | processed_pseudogene | |
|
ENSG00000225580 (RP1-159M24.1) |
ENST00000418595 (RP1-159M24.1-001)
|
112616703-112617880 | processed_pseudogene | |
|
ENSG00000226440 (RP11-506B6.6) |
ENST00000433684 (RP11-506B6.6-001)
|
112236093-112306683 | antisense | |
|
ENST00000585450 (RP11-506B6.6-002)
|
112236806-112306571 | antisense | ||
|
ENST00000585504 (RP11-506B6.6-010)
|
112236806-112345321 | antisense | ||
|
ENST00000585611 (RP11-506B6.6-008)
|
112236806-112349918 | antisense | ||
|
ENST00000587816 (RP11-506B6.6-009)
|
112236806-112350094 | antisense | ||
|
ENST00000588837 (RP11-506B6.6-005)
|
112236806-112279526 | antisense | ||
|
ENST00000590293 (RP11-506B6.6-006)
|
112236806-112292832 | antisense | ||
|
ENST00000590584 (RP11-506B6.6-004)
|
112236806-112306683 | antisense | ||
|
ENST00000590673 (RP11-506B6.6-007)
|
112236806-112349814 | antisense | ||
|
ENST00000590804 (RP11-506B6.6-003)
|
112236806-112306679 | antisense | ||
|
ENSG00000251258 (RFPL4B) ret finger protein-like 4B |
ENST00000441065 (RFPL4B-001)
|
112347330-112351296 | protein_coding | |
|
ENSG00000270661 (RP1-142L7.9) |
ENST00000603682 (RP1-142L7.9-001)
|
112217640-112219570 | lincRNA | |
|
ENSG00000271208 (RP1-142L7.8) |
ENST00000605586 (RP1-142L7.8-001)
|
112234165-112234758 | lincRNA | |
| CIL_0008LU_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| hs1302 | VISTA | 10090 | 10:38252269-38856079 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000094311 (Rfpl4b) ret finger protein-like 4B |
ENSMUST00000179279 (Rfpl4b-001)
|
38820541-38821779 | protein_coding | |
Expression Patterns
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