C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: laminin, alpha 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000389463 LAMA4-009 ENSG00000112769 9606 - 6:112108874-112254600 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000389463
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000389463 18.521±0.00 5.846±0.00 1.050±0.00 1.210±0.00 18.519±4.50 5.206±0.20 5.064±0.02 9.255±9.15 10.342±3.64 1.553±0.53 6.822±3.47 13.655±1.55 2.734±0.17

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004713 IEA protein tyrosine kinase activity
GO:0004871 IEA signal transducer activity
GO:0005102 IEA receptor binding
GO:0005515 IEA protein binding
GO:0005606 IEA laminin-1 complex
GO:0005925 IEA focal adhesion
GO:0006468 IEA protein phosphorylation
GO:0007155 IEA cell adhesion
GO:0007172 IEA signal complex assembly
GO:0030155 IEA regulation of cell adhesion
GO:0030334 IEA regulation of cell migration
GO:0045995 IEA regulation of embryonic development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000019992 Lama4-001 protein_coding Mus_musculus 0 5794
ENSMUST00000159580 Lama4-005 retained_intron Mus_musculus 0 1712
ENSMUST00000162211 Lama4-004 retained_intron Mus_musculus 0 1461
ENSMUST00000161303 Lama4-003 retained_intron Mus_musculus 0 1210
ENSMUST00000163036 Lama4-007 retained_intron Mus_musculus 0 340
ENSMUST00000161992 Lama4-006 retained_intron Mus_musculus 1.99993e-41 176

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