C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008MV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1601 VISTA 9606 8:91297044-91901193
GeneTranscriptPositionBiotype
ENSG00000147606 (SLC26A7)
solute carrier family 26 (anion exchanger), member 7 		ENST00000276609 (SLC26A7-003) 91249288-91398150 protein_coding
ENST00000309536 (SLC26A7-004) 91249307-91394718 protein_coding
ENST00000517930 (SLC26A7-008) 91357248-91393836 processed_transcript
ENST00000520249 (SLC26A7-005) 91343030-91398138 processed_transcript
ENST00000520818 (SLC26A7-007) 91295624-91340658 protein_coding
ENST00000522181 (SLC26A7-002) 91209494-91395649 nonsense_mediated_decay
ENST00000522862 (SLC26A7-006) 91209495-91318359 protein_coding
ENST00000523719 (SLC26A7-001) 91209500-91395756 protein_coding
ENST00000617078 (SLC26A7-201) 91218888-91398152 protein_coding
ENST00000617233 (SLC26A7-202) 91218888-91398152 protein_coding
ENSG00000253901 (RP11-122C21.1)
 ENST00000518416 (RP11-122C21.1-002) 91564980-91907453 lincRNA
ENST00000521199 (RP11-122C21.1-001) 91542924-91907619 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0008MV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1601 VISTA 10090 4:13972132-14578417
GeneTranscriptPositionBiotype
ENSMUSG00000040569 (Slc26a7)
solute carrier family 26, member 7 		ENSMUST00000042221 (Slc26a7-001) 14502430-14621805 protein_coding
ENSMUST00000138042 (Slc26a7-004) 14505289-14516369 processed_transcript
ENSMUST00000143105 (Slc26a7-002) 14593817-14621669 protein_coding
ENSMUST00000149633 (Slc26a7-003) 14565480-14621497 protein_coding
ENSMUSG00000081239 (Gm11836)
predicted gene 11836 		ENSMUST00000121022 (Gm11836-001) 14433891-14434331 processed_pseudogene
ENSMUSG00000082128 (Gm11824)
predicted gene 11824 		ENSMUST00000120191 (Gm11824-001) 14170066-14170911 processed_pseudogene
ENSMUSG00000086068 (1700120G11Rik)
RIKEN cDNA 1700120G11 gene 		ENSMUST00000150273 (1700120G11Rik-001) 14219496-14237450 lincRNA
ENSMUSG00000086927 (Gm11823)
predicted gene 11823 		ENSMUST00000130582 (Gm11823-001) 13919954-13995193 lincRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008MV_0001ENSG00000147606ENST00000276609ENST00000309536ENST00000517930ENST00000520249ENST00000520818ENST00000522181ENST00000522862ENST00000523719ENST00000617078ENST00000617233ENSG00000253901ENST00000518416ENST00000521199CIL_0008MV_0002ENSMUSG00000040569ENSMUST00000042221ENSMUST00000138042ENSMUST00000143105ENSMUST00000149633ENSMUSG00000081239ENSMUST00000121022ENSMUSG00000082128ENSMUST00000120191ENSMUSG00000086068ENSMUST00000150273ENSMUSG00000086927ENSMUST00000130582
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008MV_0001ENSG00000147606ENST00000276609ENST00000309536ENST00000517930ENST00000520249ENST00000522181ENST00000522862ENST00000523719ENST00000617078ENST00000617233ENSG00000253901ENST00000518416ENST00000521199CIL_0008MV_0002ENSMUSG00000040569ENSMUST00000042221ENSMUST00000138042ENSMUST00000143105ENSMUST00000149633ENSMUSG00000081239ENSMUST00000121022ENSMUSG00000082128ENSMUST00000120191ENSMUSG00000086068ENSMUST00000150273ENSMUSG00000086927ENSMUST00000130582
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000147606 ENST00000276609 N/A N/A N/A N/A 0.193±0.15 N/A N/A N/A 0.129±0.00 0.343±0.00 N/A N/A N/A N/A
ENST00000309536 N/A N/A 7.275±0.00 N/A N/A N/A 0.031±0.00 N/A N/A 0.333±0.00 N/A N/A N/A N/A
ENST00000517930 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.064±0.00 N/A N/A N/A
ENST00000520249 N/A N/A N/A 0.033±0.02 N/A 0.027±0.00 N/A N/A 0.071±0.06 N/A N/A 0.072±0.06 N/A 0.198±0.00
ENST00000520818 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522181 0.052±0.00 N/A N/A N/A N/A N/A 0.051±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000522862 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.069±0.00 N/A
ENST00000523719 N/A N/A N/A N/A N/A N/A 0.075±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000617078 N/A N/A N/A N/A N/A N/A 0.043±0.00 2.271±0.00 N/A N/A N/A N/A 0.075±0.00 0.238±0.00
ENST00000617233 N/A 0.473±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.117±0.00 N/A
ENSG00000253901 ENST00000518416 N/A 0.130±0.00 N/A 0.032±0.00 0.092±0.00 N/A N/A 0.089±0.00 0.079±0.00 N/A N/A N/A N/A N/A
ENST00000521199 N/A 0.036±0.00 N/A N/A N/A N/A N/A 0.021±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000040569 ENSMUST00000042221 14.180±0.25 0.042±0.00 0.302±0.00 0.144±0.06 0.029±0.00 0.061±0.03 0.034±0.01 N/A N/A 0.012±0.00 0.018±0.01 5.971±3.07 1.398±1.01 1.254±0.59
ENSMUST00000138042 N/A N/A N/A N/A N/A 0.105±0.01 0.215±0.02 N/A N/A N/A 0.061±0.00 N/A N/A N/A
ENSMUST00000143105 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.093±0.00
ENSMUST00000149633 N/A N/A N/A N/A 0.122±0.02 N/A 0.030±0.00 0.752±0.09 0.049±0.00 0.078±0.01 N/A 15.360±2.91 N/A 4.075±0.00
ENSMUSG00000081239 ENSMUST00000121022 1.277±0.38 N/A 0.097±0.01 0.120±0.10 0.267±0.03 0.159±0.00 0.157±0.04 0.300±0.18 0.056±0.03 0.153±0.04 N/A 0.471±0.22 0.230±0.21 0.178±0.09
ENSMUSG00000082128 ENSMUST00000120191 2.486±0.39 N/A 0.047±0.02 1.017±0.97 1.850±0.42 0.924±0.62 0.493±0.19 0.633±0.43 0.779±1.89 0.683±0.15 0.098±0.02 4.801±2.62 0.020±0.00 0.237±0.05
ENSMUSG00000086068 ENSMUST00000150273 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.339±1.82
ENSMUSG00000086927 ENSMUST00000130582 N/A N/A N/A 0.004±0.00 N/A N/A N/A N/A 0.002±0.00 N/A N/A N/A 0.002±0.00 N/A

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