C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 26, member 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000042221 Slc26a7-001 ENSMUSG00000040569 10090 - 4:14502430-14621805 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLungMuscleOvaryPlacentaTestisENSMUST00000042221
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Lung Muscle Ovary Placenta Testis
ENSMUST00000042221 14.180±0.25 0.042±0.00 0.302±0.00 0.144±0.06 0.029±0.00 0.061±0.03 0.034±0.01 0.012±0.00 0.018±0.01 5.971±3.07 1.398±1.01 1.254±0.59

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008MV CIL_0008MV_0002 VISTA 4:13972132-14578417

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001696 IDA gastric acid secretion
GO:0005253 IMP anion channel activity
GO:0005254 IDA chloride channel activity
GO:0005737 IEA cytoplasm
GO:0005768 IEA endosome
GO:0006820 IMP anion transport
GO:0006821 IDA chloride transport
GO:0015106 IMP bicarbonate transmembrane transporter activity
GO:0015116 IEA sulfate transmembrane transporter activity
GO:0015301 IEA anion:anion antiporter activity
GO:0015701 IMP bicarbonate transport
GO:0016021 IC integral component of membrane
GO:0016323 IDA basolateral plasma membrane
GO:0019531 IEA oxalate transmembrane transporter activity
GO:0019532 IEA oxalate transport
GO:1902358 IEA sulfate transmembrane transport
GO:1902476 IDA chloride transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000276609 SLC26A7-003 protein_coding Homo_sapiens 0 2355
ENST00000309536 SLC26A7-004 protein_coding Homo_sapiens 0 2204
ENST00000517930 SLC26A7-008 processed_transcript Homo_sapiens 0 479
ENST00000520249 SLC26A7-005 processed_transcript Homo_sapiens 0 1142
ENST00000520818 SLC26A7-007 protein_coding Homo_sapiens 0 745
ENST00000522181 SLC26A7-002 nonsense_mediated_decay Homo_sapiens 0 1330
ENST00000522862 SLC26A7-006 protein_coding Homo_sapiens 0 719
ENST00000523719 SLC26A7-001 protein_coding Homo_sapiens 0 2355
ENST00000617078 SLC26A7-201 protein_coding Homo_sapiens 0 1330
ENST00000617233 SLC26A7-202 protein_coding Homo_sapiens 0 2355

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